Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_02855 and AO353_02860 are separated by 3 nucleotidesAO353_02860 and AO353_02865 are separated by 249 nucleotidesAO353_02865 and AO353_02870 are separated by 45 nucleotidesAO353_02870 and AO353_02875 are separated by 81 nucleotides AO353_02855: AO353_02855 - flagellar basal-body rod protein FlgC, at 608,067 to 608,510 _02855 AO353_02860: AO353_02860 - flagellar biosynthesis protein FlgB, at 608,514 to 608,921 _02860 AO353_02865: AO353_02865 - chemotaxis protein, at 609,171 to 609,998 _02865 AO353_02870: AO353_02870 - chemotaxis protein CheW, at 610,044 to 610,976 _02870 AO353_02875: AO353_02875 - flagellar biosynthesis protein FlgA, at 611,058 to 611,819 _02875
Group Condition AO353_02855 AO353_02860 AO353_02865 AO353_02870 AO353_02875
motility outer cut, LB soft agar motility assay -2.7 -3.5 -3.0 -0.3 -3.7
motility outer cut, LB soft agar motility assay -2.7 -2.8 -2.1 -0.5 -2.7
motility outer cut, LB soft agar motility assay -2.4 -3.0 -2.0 -0.5 -2.8
survival 4C survival; 360 hrs -1.7 -2.9 -1.6 -0.1 -1.7
survival 4C survival; 192 hrs -1.3 -2.0 -1.0 -0.4 -1.4
survival 4C survival; 672 hrs -1.5 -1.4 -1.3 -0.0 -1.4
stress Cobalt chloride 0.32 mM -0.4 -0.4 +0.1 -0.5 +0.2
carbon source L-Ornithine +0.0 -0.1 +0.5 -0.3 +0.4
stress Benzalkonium Chloride 0.012 mg/ml +0.6 -0.4 +0.2 +0.1 -0.0
carbon source L-Citrulline +0.4 -0.2 +0.4 -0.3 +0.2
stress Thallium(I) acetate 0.016 mg/ml +0.2 +0.4 +0.0 -0.4 +0.2
stress Rifampicin 0.005 mg/ml +0.7 +0.6 -0.3 -0.1 -0.1
carbon source L-Ornithine +0.6 -0.4 +0.1 -0.3 +0.7
stress Cholin acetate 38 mM +0.2 +0.3 +0.3 +0.2 -0.2
stress methylglyoxal 0.009 vol% -0.2 +0.2 +0.3 +0.5 -0.0
nitrogen source Glycine (N) +0.5 +0.3 -0.0 -0.1 +0.3
stress Thallium(I) acetate 0.008 mg/ml +0.4 +0.7 +0.0 -0.4 +0.3
stress Thallium(I) acetate 0.016 mg/ml +0.2 +0.5 +0.4 -0.3 +0.3
pH Minimal media pH6 +0.4 +0.1 +0.2 -0.0 +0.5
nitrogen source Parabanic Acid (N) +0.6 +0.4 +0.2 -0.2 +0.4
carbon source L-Tryptophan (C) +0.4 +0.3 +0.2 +0.0 +0.4
carbon source D-Glucose +0.4 +0.3 +0.1 -0.0 +0.5
nitrogen source Inosine (N) +0.5 +0.5 -0.1 -0.1 +0.5
stress 1-ethyl-3-methylimidazolium acetate 20 mM +0.6 +0.3 +0.3 +0.0 +0.2
carbon source L-Ornithine +0.2 +0.6 +0.2 -0.2 +0.6
carbon source a-Ketoglutaric (C) +0.5 +0.7 +0.2 -0.1 +0.6
stress Doxycycline hyclate 0.0006 mg/ml +0.5 +0.7 +0.1 +0.3 +0.4
nitrogen source Urea (N) +0.7 +0.9 +0.0 +0.3 +0.3
carbon source D-Glucosamine Hydrochloride (C) +0.9 +0.9 -0.0 -0.1 +0.6
denitrifying Nitrate reduction, replicate C +0.6 +1.0 +0.4 -0.2 +0.7
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