Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_02795 and AO353_02800 are separated by 145 nucleotidesAO353_02800 and AO353_02805 are separated by 336 nucleotidesAO353_02805 and AO353_02810 are separated by 30 nucleotidesAO353_02810 and AO353_02815 overlap by 4 nucleotides AO353_02795: AO353_02795 - carnitine dehydratase, at 591,669 to 592,850 _02795 AO353_02800: AO353_02800 - C4-dicarboxylate transporter, at 592,996 to 594,330 _02800 AO353_02805: AO353_02805 - AraC family transcriptional regulator, at 594,667 to 595,665 _02805 AO353_02810: AO353_02810 - histidine kinase, at 595,696 to 597,042 _02810 AO353_02815: AO353_02815 - transcriptional regulator, at 597,039 to 597,716 _02815
Group Condition AO353_02795 AO353_02800 AO353_02805 AO353_02810 AO353_02815
carbon source Fumarate (C) -0.1 -3.5 -0.5 -1.2 +0.1
carbon source succinate (C) +0.1 -3.0 -0.1 -1.9 +0.2
carbon source Fumarate (C) +0.2 -3.6 -0.5 -1.0 +0.3
carbon source succinate (C) +0.0 -3.1 -0.0 -1.4 +0.1
carbon source L-Malic (C) +0.2 -2.6 -0.1 -1.1 +0.2
carbon source L-Malic (C) +0.1 -2.4 -0.2 -0.7 +0.0
stress Lomefloxacin 0.001 mM +0.0 +0.1 -0.0 -0.7 -2.1
stress Polymyxin B sulfate 4 mg/ml +0.0 -0.1 -0.1 -1.0 -1.0
carbon source a-Ketoglutaric (C) -0.0 -0.7 +0.1 -1.4 -0.1
stress Tetracycline 0.0008 mg/ml +0.0 -0.3 +0.1 -0.8 -1.1
stress Nickel (II) chloride 0.625 mM +0.1 -0.6 -0.0 -2.4 +0.9
stress Benzalkonium Chloride 0.012 mg/ml -0.3 +0.2 -0.4 +0.2 -1.5
carbon source propionate (C) +0.1 +0.2 -0.0 -2.0 +0.0
stress Cobalt chloride 0.16 mM -0.0 +0.1 -0.1 -2.0 +0.4
carbon source D-Lactate (C) +0.2 -0.1 -0.1 -1.9 +0.3
stress Cobalt chloride 0.16 mM -0.1 -0.3 -0.0 -1.8 +0.6
carbon source butyrate (C) -0.0 +0.1 +0.2 -1.6 -0.3
carbon source L-Phenylalanine (C) -0.3 +0.1 +0.3 -1.7 +0.0
stress Doxycycline hyclate 0.0006 mg/ml +0.2 +0.2 +0.0 -0.6 -1.4
stress Cobalt chloride 0.32 mM -0.0 +0.0 +0.0 -2.0 +0.5
carbon source D-Trehalose (C) +0.1 +0.3 -0.1 -1.9 +0.1
motility outer cut, LB soft agar motility assay -0.5 -0.1 +0.3 -1.3 +0.3
carbon source D-Trehalose (C) +0.2 +0.4 +0.1 -2.0 +0.1
stress 1-ethyl-3-methylimidazolium lysine 10.5 mM +0.1 +0.2 -0.2 -1.8 +0.7
stress Cisplatin 0.006 mg/ml -0.3 -0.3 -0.6 +1.0 -0.4
stress nitrate 200 mM -0.2 +0.2 +0.2 +0.8 -1.4
stress Nickel (II) chloride 0.625 mM +0.0 -0.3 +0.2 -1.2 +0.9
carbon source acetate (C) +0.3 +0.9 +0.4 -1.1 +0.2
stress Fusidic 0.125 mg/ml -0.3 -0.5 +0.2 +0.0 +1.4
stress Cisplatin 0.006 mg/ml -0.2 -0.0 +0.0 +1.7 -0.6
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