Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_02735 and AO353_02740 are separated by 66 nucleotidesAO353_02740 and AO353_02745 are separated by 81 nucleotidesAO353_02745 and AO353_02750 overlap by 1 nucleotidesAO353_02750 and AO353_02755 are separated by 196 nucleotides AO353_02735: AO353_02735 - chemotaxis protein CheY, at 581,276 to 584,026 _02735 AO353_02740: AO353_02740 - hydroxyacid dehydrogenase, at 584,093 to 585,082 _02740 AO353_02745: AO353_02745 - hypothetical protein, at 585,164 to 585,598 _02745 AO353_02750: AO353_02750 - hypothetical protein, at 585,598 to 586,002 _02750 AO353_02755: AO353_02755 - peroxiredoxin, at 586,199 to 586,666 _02755
Group Condition AO353_02735 AO353_02740 AO353_02745 AO353_02750 AO353_02755
stress methylglyoxal 0.009 vol% -2.5 +0.6 N.D. -0.3 +0.3
carbon source L-Citrulline +2.7 +0.3 N.D. -0.8 -0.9
carbon source D-Glucose +2.9 -0.6 N.D. -0.2 -0.6
carbon source L-Ornithine +2.3 +0.3 N.D. +0.2 -1.2
carbon source L-Citrulline +2.5 +0.5 N.D. -0.5 -0.9
carbon source D-Glucose +2.9 +0.4 N.D. +0.2 -1.1
survival 4C survival; 192 hrs +3.1 -0.2 N.D. -0.1 -0.4
stress perchlorate 75 mM +3.4 -0.2 N.D. -0.0 -0.4
motility outer cut, LB soft agar motility assay +3.4 -0.5 N.D. -0.2 -0.0
carbon source L-Asparagine (C) +3.3 +0.0 N.D. -0.3 -0.0
denitrifying Nitrate reduction, replicate C +2.9 +0.3 N.D. +0.0 -0.2
carbon source pyruvate (C) +3.1 +0.1 N.D. -0.3 +0.2
carbon source L-Asparagine (C) +3.1 +0.1 N.D. -0.1 +0.1
carbon source D-Lactate (C) +3.3 -0.2 N.D. +0.1 +0.1
stress Sisomicin 0.008 mg/ml +2.9 +0.5 N.D. +0.1 -0.1
carbon source L-Proline (C) +3.2 +0.1 N.D. -0.0 +0.1
denitrifying Nitrate reduction, replicate B +3.1 +0.5 N.D. +0.4 -0.3
carbon source succinate (C) +3.6 -0.2 N.D. +0.3 -0.0
carbon source Putrescine (C) +3.9 +0.1 N.D. -0.0 -0.2
carbon source succinate (C) +3.6 -0.1 N.D. +0.2 +0.1
motility outer cut, LB soft agar motility assay +3.1 -0.0 N.D. +0.3 +0.5
motility outer cut, LB soft agar motility assay +3.6 -0.1 N.D. +0.3 +0.2
carbon source Carnitine Hydrochloride (C) +4.1 +0.1 N.D. -0.1 +0.0
nitrogen source Adenosine (N) +4.5 +0.0 N.D. -0.3 -0.1
carbon source propionate (C) +5.0 -0.4 N.D. +0.0 +0.1
survival 4C survival; 360 hrs +4.8 +0.2 N.D. +0.2 -0.2
carbon source acetate (C) +5.9 -0.1 N.D. -0.0 -0.0
carbon source acetate (C) +6.4 -0.1 N.D. -0.6 +0.0
carbon source L-Serine (C) +5.9 +0.1 N.D. -0.1 +0.1
survival 4C survival; 672 hrs +7.2 +0.4 N.D. +0.1 -0.4
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