Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_02610 and AO353_02615 are separated by 12 nucleotidesAO353_02615 and AO353_02620 overlap by 4 nucleotidesAO353_02620 and AO353_02625 overlap by 8 nucleotidesAO353_02625 and AO353_02630 overlap by 4 nucleotides AO353_02610: AO353_02610 - adenosylcobinamide kinase, at 556,830 to 557,351 _02610 AO353_02615: AO353_02615 - cobyric acid synthase, at 557,364 to 558,815 _02615 AO353_02620: AO353_02620 - threonine-phosphate decarboxylase, at 558,812 to 559,804 _02620 AO353_02625: AO353_02625 - cobalamin biosynthesis protein CobD, at 559,797 to 560,705 _02625 AO353_02630: AO353_02630 - 5,6-dimethylbenzimidazole synthase, at 560,702 to 561,352 _02630
Group Condition AO353_02610 AO353_02615 AO353_02620 AO353_02625 AO353_02630
nitrogen source Adenosine (N) -3.2 -2.8 -1.7 -2.3 -0.0
nitrogen source L-Glutamic (N) -1.9 -2.2 -1.9 -1.9 -0.8
nitrogen source L-Glutamine (N) -2.2 -2.0 -1.7 -2.2 -0.2
nitrogen source L-Glutamine (N) -1.5 -2.0 -1.5 -2.0 -0.8
nitrogen source L-Glutamic (N) -2.0 -2.0 -1.2 -1.9 -0.0
nitrogen source L-Histidine (N) -1.6 -1.7 -1.9 -1.5 -0.5
nitrogen source L-Histidine (N) -1.7 -1.4 -1.4 -1.7 -0.4
nitrogen source Glycine (N) -2.2 -2.0 -0.5 -1.6 -0.0
nitrogen source Putrescine (N) -1.1 -1.0 -0.5 -1.1 -1.1
nitrogen source Glycine (N) -1.5 -1.3 -0.2 -1.7 +0.1
nitrogen source L-Arginine (N) -1.5 -1.0 -0.6 -1.1 -0.1
pH Minimal media pH6 -1.4 -1.0 -0.9 -0.7 -0.2
nitrogen source nitrite (N) -0.8 -1.2 -0.5 -1.2 -0.2
nitrogen source L-Arginine (N) -0.9 -0.8 -0.8 -1.1 -0.0
nitrogen source L-Serine (N) -0.8 -0.6 -0.5 -0.8 -0.9
pH Minimal media pH8 -0.7 -0.8 -0.7 -0.7 -0.7
nitrogen source D-Serine (N) -0.8 -0.8 -0.6 -1.0 -0.5
nitrogen source L-Citrulline (N) -0.5 -1.0 -0.8 -1.0 -0.3
nitrogen source Carnitine Hydrochloride (N) -0.9 -0.8 -0.2 -1.0 -0.4
pH Minimal media pH7 -0.7 -0.9 -1.2 -0.6 +0.1
carbon source D-Serine (C) -0.8 -0.5 -0.6 -1.4 +0.1
pH Minimal media pH6 -0.6 -0.7 -0.9 -0.8 -0.2
carbon source L-Alanine (C) -0.9 -0.8 -1.0 -0.4 +0.0
nitrogen source Ammonium chloride (N) -0.8 -0.7 -0.5 -0.6 -0.2
pH Minimal media pH8 -0.5 -0.8 -0.5 -0.6 -0.4
carbon source Carnitine Hydrochloride (C) -0.6 -0.4 -0.3 -0.7 -0.7
motility outer cut, LB soft agar motility assay -0.4 -1.1 +0.9 +0.3 +0.7
stress Sisomicin 0.008 mg/ml +0.8 +0.5 +0.6 -0.4 -0.5
carbon source L-Ornithine +0.4 +0.6 +0.8 -0.0 -0.9
motility outer cut, LB soft agar motility assay -0.5 -0.1 +0.6 +0.6 +1.0
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