Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_02530 and AO353_02535 are separated by 84 nucleotidesAO353_02535 and AO353_02540 are separated by 106 nucleotidesAO353_02540 and AO353_02545 are separated by 84 nucleotidesAO353_02545 and AO353_02550 are separated by 91 nucleotides AO353_02530: AO353_02530 - glycerol acyltransferase, at 538,151 to 540,025 _02530 AO353_02535: AO353_02535 - C4-dicarboxylate ABC transporter, at 540,110 to 541,261 _02535 AO353_02540: AO353_02540 - cupin, at 541,368 to 541,679 _02540 AO353_02545: AO353_02545 - MFS transporter, at 541,764 to 542,948 _02545 AO353_02550: AO353_02550 - TetR family transcriptional regulator, at 543,040 to 543,579 _02550
Group Condition AO353_02530 AO353_02535 AO353_02540 AO353_02545 AO353_02550
carbon source acetate (C) -0.1 +0.2 -0.6 -0.7 -3.9
carbon source acetate (C) -0.2 +0.0 -0.2 -0.3 -3.7
carbon source butyrate (C) -0.0 +0.0 +0.0 -0.2 -4.1
carbon source propionate (C) -0.2 -0.1 +0.3 +0.0 -4.1
carbon source propionate (C) -0.1 +0.1 -0.1 -0.0 -3.8
carbon source L-Tryptophan (C) -0.1 -0.2 -0.1 -0.1 -1.6
carbon source L-Leucine (C) -0.0 +0.0 +0.0 -0.4 -1.5
stress Doxycycline hyclate 0.0006 mg/ml -0.0 -0.7 -0.3 +0.1 -0.4
carbon source L-Ornithine +0.1 +0.0 +0.0 -0.1 -1.4
carbon source D-Glucose +0.2 -0.0 -0.3 -0.5 -0.6
nitrogen source L-Tryptophan (N) +0.0 +0.1 -0.5 +0.0 -0.9
carbon source pyruvate (C) -0.0 +0.0 +0.3 -0.1 -1.4
carbon source L-Citrulline +0.2 +0.2 -0.1 +0.0 -1.2
carbon source D-Glucose +0.1 +0.2 -0.3 +0.1 -0.8
stress Cobalt chloride 0.16 mM +0.0 +0.2 -0.4 +0.2 -0.7
stress Cisplatin 0.006 mg/ml +0.2 +0.2 -0.3 +0.1 -0.7
carbon source L-Phenylalanine (C) +0.1 +0.2 +0.3 +0.1 -1.1
stress methylglyoxal 0.009 vol% +0.2 -0.5 +0.3 -0.3 +0.2
motility outer cut, LB soft agar motility assay +0.3 +0.4 +0.3 +0.3 -1.4
nitrogen source D-Alanine (N) +0.1 +0.2 +0.3 +0.2 -0.7
stress Sisomicin 0.008 mg/ml -0.2 -0.5 -0.2 -0.3 +1.2
stress Paraquat dichloride 0.032 mg/mL +0.0 -0.7 +0.2 +0.3 +0.5
carbon source L-Ornithine +0.5 +0.3 +0.0 +0.4 -0.3
stress Cholin acetate 19 mM +0.1 -0.1 -0.1 +0.2 +0.9
stress 1-ethyl-3-methylimidazolium acetate 20 mM -0.1 -0.2 +0.2 +0.4 +0.7
pH Minimal media pH9 -0.2 +0.2 +0.4 +0.0 +0.7
carbon source L-Ornithine +0.1 +0.5 +0.7 +0.2 -0.1
stress Cholin acetate 38 mM +0.1 -0.1 +0.1 +0.5 +0.8
stress acetate 34 mM +0.0 +0.0 +0.1 +0.3 +1.3
nitrogen source L-Phenylalanine (N) -0.0 -0.2 +0.2 -0.1 +4.2
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