Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_02510 and AO353_02515 are separated by 160 nucleotidesAO353_02515 and AO353_02520 are separated by 145 nucleotidesAO353_02520 and AO353_02525 are separated by 118 nucleotidesAO353_02525 and AO353_02530 are separated by 91 nucleotides AO353_02510: AO353_02510 - tRNA-Val, at 535,353 to 535,428 _02510 AO353_02515: AO353_02515 - recombination-associated protein RdgC, at 535,589 to 536,509 _02515 AO353_02520: AO353_02520 - sodium transporter, at 536,655 to 537,620 _02520 AO353_02525: AO353_02525 - molecular chaperone, at 537,739 to 538,059 _02525 AO353_02530: AO353_02530 - glycerol acyltransferase, at 538,151 to 540,025 _02530
Group Condition AO353_02510 AO353_02515 AO353_02520 AO353_02525 AO353_02530
motility outer cut, LB soft agar motility assay N.D. -1.6 -2.5 +0.4 -0.0
stress Cisplatin 0.006 mg/ml N.D. -2.6 -0.9 +0.5 +0.0
carbon source L-Ornithine N.D. -1.2 -2.0 +0.4 +0.1
carbon source D-Glucose N.D. -1.4 -0.8 -0.4 +0.1
carbon source D-Trehalose (C) N.D. -1.3 -0.6 -0.3 +0.1
carbon source L-Tryptophan (C) N.D. -1.5 -0.4 -0.1 -0.1
motility outer cut, LB soft agar motility assay N.D. -0.4 -1.7 -0.1 +0.3
motility outer cut, LB soft agar motility assay N.D. -1.9 +0.6 -0.8 +0.3
stress Cisplatin 0.006 mg/ml N.D. -2.5 +0.2 +0.3 +0.2
carbon source L-Ornithine N.D. -0.4 -1.9 +0.0 +0.5
stress nitrate 200 mM N.D. -1.1 -0.6 -0.3 +0.2
stress Lomefloxacin 0.001 mM N.D. -0.6 -1.3 +0.3 -0.1
stress Sisomicin 0.008 mg/ml N.D. +1.0 -1.4 -1.0 -0.2
carbon source Fumarate (C) N.D. -0.4 -0.9 -0.3 +0.1
carbon source L-Proline (C) N.D. -0.5 -1.1 +0.1 -0.1
stress methylglyoxal 0.009 vol% N.D. -1.0 -1.0 +0.2 +0.2
radiation Ionizing radiation, 126.196 Gy, N.D. -0.6 -1.2 +0.4 +0.1
stress Doxycycline hyclate 0.0006 mg/ml N.D. +0.2 -0.5 -0.9 -0.0
carbon source D-Lactate (C) N.D. -0.7 -0.8 +0.3 -0.1
carbon source D-Trehalose (C) N.D. -1.2 +0.5 -0.4 -0.0
stress Benzalkonium Chloride 0.012 mg/ml N.D. -0.8 +0.4 -0.6 -0.0
anaerobic Anaerobic, acetate donor; nitrate and iron N.D. +0.4 -2.0 +0.3 +0.3
carbon source L-Ornithine N.D. -1.0 -0.3 +0.9 -0.0
denitrifying Nitrate reduction, replicate B N.D. -0.7 +0.7 -0.2 -0.1
carbon source L-Citrulline N.D. -0.8 +1.2 -0.8 +0.3
carbon source D,L-Lactate (C) N.D. -0.6 +0.6 +0.5 -0.1
carbon source L-Proline (C) N.D. -0.6 -0.1 +0.9 +0.2
carbon source L-Leucine (C) N.D. -0.4 +1.3 +0.2 -0.0
carbon source acetate (C) N.D. +2.0 -0.4 +0.5 -0.1
carbon source acetate (C) N.D. +1.5 +0.3 +0.7 -0.2
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