Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_02445 and AO353_02450 are separated by 47 nucleotidesAO353_02450 and AO353_02455 overlap by 8 nucleotidesAO353_02455 and AO353_02460 are separated by 229 nucleotidesAO353_02460 and AO353_02465 are separated by 0 nucleotides AO353_02445: AO353_02445 - diguanylate phosphodiesterase, at 521,597 to 523,372 _02445 AO353_02450: AO353_02450 - hypothetical protein, at 523,420 to 523,794 _02450 AO353_02455: AO353_02455 - type IV secretion protein Rhs, at 523,787 to 528,595 _02455 AO353_02460: AO353_02460 - hypothetical protein, at 528,825 to 529,226 _02460 AO353_02465: AO353_02465 - hypothetical protein, at 529,227 to 529,598 _02465
Group Condition AO353_02445 AO353_02450 AO353_02455 AO353_02460 AO353_02465
carbon source propionate (C) -0.2 -0.2 +0.0 -0.2 -3.3
carbon source L-Alanine (C) -0.3 -1.0 -0.0 -0.2 -1.4
motility outer cut, LB soft agar motility assay -0.8 -0.4 -0.0 -0.9 -0.6
stress Cisplatin 0.006 mg/ml -0.4 +0.3 -0.2 -1.1 -1.2
stress Cisplatin 0.006 mg/ml -0.6 -0.4 +0.2 -0.3 -1.5
carbon source L-Aspartic Acid (C) +0.0 -0.5 +0.0 -0.4 -1.8
carbon source propionate (C) -0.0 -0.3 +0.2 -0.0 -2.4
motility outer cut, LB soft agar motility assay -0.4 -1.4 -0.1 +0.3 -0.9
carbon source a-Ketoglutaric (C) -0.1 -0.4 -0.0 -0.1 -1.8
nitrogen source L-Histidine (N) +0.3 -0.1 -0.0 +0.1 -2.7
carbon source a-Ketoglutaric (C) -0.2 -0.4 +0.0 -0.6 -1.2
stress Thallium(I) acetate 0.008 mg/ml -0.1 -0.1 +0.1 -0.2 -1.9
stress Doxycycline hyclate 0.0006 mg/ml -0.4 +0.1 -0.3 -0.2 -1.3
carbon source D-Lactate (C) -0.3 -0.2 +0.1 -0.3 -1.3
stress 1-ethyl-3-methylimidazolium lysine 10.5 mM -0.1 -0.4 -0.0 +0.1 -1.5
stress Thallium(I) acetate 0.016 mg/ml -0.1 -0.1 +0.1 -0.1 -1.6
carbon source L-Serine (C) +0.2 -0.2 -0.1 -0.5 -1.0
carbon source L-Phenylalanine (C) +0.1 -0.3 +0.1 -0.0 -1.5
stress Furfuryl Alcohol 0.25 vol% +0.2 -0.8 -0.0 +0.4 -0.6
carbon source L-Ornithine -0.2 -1.3 +0.0 +0.4 +1.1
carbon source L-Ornithine +0.1 -1.0 +0.0 +0.3 +0.7
anaerobic Anaerobic, acetate donor; nitrate and iron -0.8 +0.0 -0.1 +0.1 +1.1
stress Lomefloxacin 0.001 mM +0.2 -0.7 -0.1 -0.4 +1.5
carbon source L-Citrulline +0.1 -0.6 -0.0 +0.1 +1.4
carbon source L-Ornithine +0.2 -0.4 -0.1 +0.4 +1.2
stress Benzalkonium Chloride 0.012 mg/ml +0.1 -0.6 +0.0 +0.2 +1.5
carbon source L-Citrulline +0.1 +0.2 +0.1 -0.2 +1.8
carbon source L-Citrulline -0.7 +0.4 -0.0 +0.4 +1.9
pH Minimal media pH9 +0.2 +0.8 +0.0 +0.8 +0.5
survival 4C survival; 672 hrs -0.0 -0.1 -0.0 +0.2 +2.8
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