Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_02315 and AO353_02320 are separated by 436 nucleotidesAO353_02320 and AO353_02325 overlap by 4 nucleotidesAO353_02325 and AO353_02330 are separated by 89 nucleotidesAO353_02330 and AO353_02335 are separated by 121 nucleotides AO353_02315: AO353_02315 - 5-hydroxyisourate hydrolase, at 492,663 to 493,016 _02315 AO353_02320: AO353_02320 - allantoinase, at 493,453 to 494,379 _02320 AO353_02325: AO353_02325 - OHCU decarboxylase, at 494,376 to 494,891 _02325 AO353_02330: AO353_02330 - allantoicase, at 494,981 to 495,976 _02330 AO353_02335: AO353_02335 - ureidoglycolate hydrolase, at 496,098 to 496,601 _02335
Group Condition AO353_02315 AO353_02320 AO353_02325 AO353_02330 AO353_02335
nitrogen source Adenine (N) -3.2 -3.1 -3.6 -2.8 -2.1
nitrogen source Inosine (N) -1.2 -2.8 -2.2 -2.8 -1.0
nitrogen source Adenosine (N) -1.3 -2.4 -2.3 -1.5 -0.2
nitrogen source Parabanic Acid (N) +0.0 -2.2 -0.8 -0.8 -0.3
carbon source Uridine (C) -0.5 -2.1 +0.1 -0.2 -0.4
carbon source m-Inositol (C) -0.6 -0.6 -0.4 -0.7 -0.6
carbon source Glycerol (C) -0.3 -2.0 -0.1 -0.5 +0.1
carbon source Glycerol (C) -0.0 -2.1 -0.4 -0.3 +0.1
carbon source D-Trehalose (C) -0.0 -1.4 -0.4 -0.6 +0.0
anaerobic Anaerobic, acetate donor; nitrate and iron +0.4 +0.9 +0.1 -3.4 -0.4
carbon source propionate (C) -0.6 -0.6 -0.2 -0.4 -0.4
carbon source propionate (C) -0.4 -0.2 -0.6 -0.4 -0.5
carbon source L-Leucine (C) -0.3 -1.1 -0.6 +0.1 +0.1
carbon source acetate (C) -1.0 -0.5 +0.3 -0.8 +0.3
carbon source L-Phenylalanine (C) +0.2 -0.5 -0.3 -1.3 +0.4
pH Minimal media pH9 -0.3 -1.3 +0.4 +0.0 -0.4
carbon source L-Ornithine -0.3 -1.0 -0.5 -0.3 +0.6
carbon source acetate (C) -0.7 -1.2 +0.5 -0.3 +0.5
motility outer cut, LB soft agar motility assay -0.5 -1.1 +0.1 -0.2 +0.6
motility outer cut, LB soft agar motility assay -0.3 -0.4 +0.4 -1.1 +0.5
survival 4C survival; 672 hrs +0.3 -1.7 +0.3 -0.6 +1.0
stress Cisplatin 0.006 mg/ml -0.9 -0.4 +0.4 +0.3 +0.2
carbon source L-Citrulline -0.8 -0.8 +0.1 +0.7 +0.7
denitrifying Nitrate reduction, replicate C -0.6 -0.2 +0.9 -0.3 +0.3
carbon source L-Valine (C) -0.0 -0.9 +0.1 +0.7 +0.4
carbon source L-Citrulline -0.3 -0.7 +0.4 +0.5 +0.5
carbon source L-Ornithine -0.4 -0.2 -0.2 +0.4 +1.1
carbon source L-Ornithine -0.0 -0.6 -0.1 +0.6 +0.8
stress Doxycycline hyclate 0.0006 mg/ml -0.5 -0.4 +0.5 +1.2 +0.4
stress Lomefloxacin 0.001 mM +0.4 +0.3 +0.3 +0.7 -0.4
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