Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 216 experiments or choose conditions or try the comparative fitness browser

500 ntAO353_02115 and AO353_02120 are separated by 45 nucleotidesAO353_02120 and AO353_02125 are separated by 211 nucleotidesAO353_02125 and AO353_02130 overlap by 8 nucleotidesAO353_02130 and AO353_02135 are separated by 3 nucleotides AO353_02115: AO353_02115 - TenA family transcriptional regulator, at 452,708 to 453,502 _02115 AO353_02120: AO353_02120 - hypothetical protein, at 453,548 to 456,007 _02120 AO353_02125: AO353_02125 - ABC transporter ATP-binding protein, at 456,219 to 458,036 _02125 AO353_02130: AO353_02130 - disulfide bond formation protein DsbA, at 458,029 to 458,664 _02130 AO353_02135: AO353_02135 - hypothetical protein, at 458,668 to 459,609 _02135
Group Condition AO353_02115 AO353_02120 AO353_02125 AO353_02130 AO353_02135
carbon source L-Ornithine -0.1 -0.2 +0.2 -2.1 -1.3
carbon source L-Citrulline -0.1 -0.3 -0.3 -2.0 -0.3
anaerobic Anaerobic, acetate donor; nitrate and iron +0.2 +0.1 -0.2 -2.1 +0.0
carbon source D-Glucose -0.5 -0.2 -0.2 -0.5 -0.5
carbon source L-Phenylalanine (C) +0.0 -0.2 -0.7 -0.7 -0.2
carbon source D-Mannose (C) +0.0 +0.0 +0.0 -0.9 -0.9
carbon source L-Ornithine -0.2 -0.2 +0.0 -0.7 -0.6
stress Sisomicin 0.008 mg/ml -0.0 -0.0 -0.2 -0.4 -0.8
carbon source L-Citrulline -0.0 -0.5 +0.5 -0.6 -0.1
stress Paraquat dichloride 0.032 mg/mL -0.2 +0.2 +0.0 +0.4 -1.1
motility outer cut, LB soft agar motility assay -0.4 -0.8 +2.1 -1.4 +0.0
stress Lomefloxacin 0.001 mM -0.1 +0.2 -0.6 -0.1 +0.6
carbon source Trisodium citrate (C) +0.1 +0.1 +0.7 -0.6 -0.2
pH Minimal media pH6 +0.3 +0.7 -0.2 -0.3 -0.2
survival 4C survival; 360 hrs +0.4 +0.6 +0.2 -0.3 -0.7
stress Cisplatin 0.006 mg/ml +0.2 -0.0 -0.6 +0.8 +0.0
stress nitrate 200 mM -0.0 -0.5 +0.9 -0.2 +0.3
pH Minimal media pH7 +0.4 +0.7 -0.1 +0.1 -0.3
stress acetate 68 mM +0.6 +0.7 -0.1 -0.4 +0.1
carbon source propionate (C) -0.0 +0.0 +0.2 -0.4 +1.1
motility outer cut, LB soft agar motility assay +0.1 -0.8 +2.1 -0.1 -0.4
nitrogen source Urea (N) -0.0 -0.5 +0.5 +0.8 +0.1
motility outer cut, LB soft agar motility assay +0.1 -0.7 +2.4 -0.2 -0.6
carbon source propionate (C) +0.2 -0.2 +0.1 -0.1 +1.4
stress Cholin acetate 19 mM +0.4 +0.6 -0.0 +0.2 +0.3
stress 1-ethyl-3-methylimidazolium acetate 20 mM +0.3 +0.6 -0.1 +0.6 +0.2
stress 1-ethyl-3-methylimidazolium acetate 15 mM +0.5 +0.7 -0.0 +0.1 +0.3
stress acetate 34 mM +0.5 +0.6 +0.1 +0.2 +0.1
stress Cholin acetate 38 mM +0.6 +0.7 +0.0 +0.6 +0.0
survival 4C survival; 672 hrs +0.7 +2.2 +0.0 +0.3 -0.8
remove
AO353_02115
plot
remove
AO353_02120
plot
remove
AO353_02125
remove
AO353_02130
plot
remove
AO353_02135
plot