Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_02110 and AO353_02115 are separated by 111 nucleotidesAO353_02115 and AO353_02120 are separated by 45 nucleotidesAO353_02120 and AO353_02125 are separated by 211 nucleotidesAO353_02125 and AO353_02130 overlap by 8 nucleotides AO353_02110: AO353_02110 - hypothetical protein, at 451,670 to 452,596 _02110 AO353_02115: AO353_02115 - TenA family transcriptional regulator, at 452,708 to 453,502 _02115 AO353_02120: AO353_02120 - hypothetical protein, at 453,548 to 456,007 _02120 AO353_02125: AO353_02125 - ABC transporter ATP-binding protein, at 456,219 to 458,036 _02125 AO353_02130: AO353_02130 - disulfide bond formation protein DsbA, at 458,029 to 458,664 _02130
Group Condition AO353_02110 AO353_02115 AO353_02120 AO353_02125 AO353_02130
carbon source L-Citrulline -0.0 -0.1 -0.3 -0.3 -2.0
carbon source L-Ornithine +0.1 -0.1 -0.2 +0.2 -2.1
carbon source L-Phenylalanine (C) -0.3 +0.0 -0.2 -0.7 -0.7
anaerobic Anaerobic, acetate donor; nitrate and iron +0.2 +0.2 +0.1 -0.2 -2.1
carbon source D-Glucose -0.0 -0.5 -0.2 -0.2 -0.5
carbon source L-Citrulline -0.0 -0.0 -0.5 +0.5 -0.6
stress methylglyoxal 0.009 vol% -0.6 +0.0 -0.1 -0.4 +0.7
stress Cisplatin 0.006 mg/ml -0.7 +0.2 -0.0 -0.6 +0.8
motility outer cut, LB soft agar motility assay +0.3 -0.4 -0.8 +2.1 -1.4
stress Sisomicin 0.008 mg/ml +0.7 -0.0 -0.0 -0.2 -0.4
stress nitrate 200 mM +0.1 -0.0 -0.5 +0.9 -0.2
nitrogen source Inosine (N) +0.2 -0.2 -0.4 +0.3 +0.4
carbon source pyruvate (C) +0.3 -0.2 -0.3 +0.6 -0.1
carbon source a-Ketoglutaric (C) +0.5 +0.0 -0.1 +0.4 -0.4
carbon source Trisodium citrate (C) +0.3 +0.1 +0.1 +0.7 -0.6
pH Minimal media pH6 +0.1 +0.3 +0.7 -0.2 -0.3
stress 1-ethyl-3-methylimidazolium acetate 30 mM +0.2 +0.4 +0.4 -0.2 -0.1
nitrogen source Urea (N) +0.1 -0.0 -0.5 +0.5 +0.8
pH Minimal media pH7 -0.1 +0.4 +0.7 -0.1 +0.1
stress acetate 68 mM +0.2 +0.6 +0.7 -0.1 -0.4
carbon source L-Tryptophan (C) +0.5 +0.0 -0.2 +0.4 +0.3
survival 4C survival; 360 hrs +0.2 +0.4 +0.6 +0.2 -0.3
stress acetate 34 mM -0.3 +0.5 +0.6 +0.1 +0.2
stress 1-ethyl-3-methylimidazolium acetate 15 mM +0.0 +0.5 +0.7 -0.0 +0.1
stress 1-ethyl-3-methylimidazolium acetate 20 mM +0.1 +0.3 +0.6 -0.1 +0.6
stress Cholin acetate 10 mM +0.2 +0.4 +0.5 +0.1 +0.3
motility outer cut, LB soft agar motility assay +0.3 +0.1 -0.7 +2.4 -0.2
stress Cholin acetate 38 mM +0.1 +0.6 +0.7 +0.0 +0.6
motility outer cut, LB soft agar motility assay +0.6 +0.1 -0.8 +2.1 -0.1
survival 4C survival; 672 hrs +0.6 +0.7 +2.2 +0.0 +0.3
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