Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_01925 and AO353_01930 are separated by 108 nucleotidesAO353_01930 and AO353_01935 are separated by 171 nucleotidesAO353_01935 and AO353_01940 overlap by 11 nucleotidesAO353_01940 and AO353_01945 are separated by 187 nucleotides AO353_01925: AO353_01925 - hydroxypyruvate isomerase, at 407,023 to 407,805 _01925 AO353_01930: AO353_01930 - 2-hydroxy-3-oxopropionate reductase, at 407,914 to 408,804 _01930 AO353_01935: AO353_01935 - hydroxypyruvate reductase, at 408,976 to 410,256 _01935 AO353_01940: AO353_01940 - pyruvate kinase, at 410,246 to 411,661 _01940 AO353_01945: AO353_01945 - urea transporter, at 411,849 to 412,769 _01945
Group Condition AO353_01925 AO353_01930 AO353_01935 AO353_01940 AO353_01945
stress Cisplatin 0.006 mg/ml +0.2 -0.5 -0.3 -1.1 -0.4
carbon source Uridine (C) -0.5 -0.8 -0.4 +0.0 -0.2
carbon source L-Alanine (C) -0.2 -0.9 +0.0 -0.2 -0.3
nitrogen source Putrescine (N) -0.4 -0.1 -0.1 -0.5 -0.3
pH Minimal media pH8 -0.2 -0.4 -0.0 -0.0 -0.7
carbon source L-Isoleucine (C) -0.2 -0.5 +0.1 +0.2 -0.4
carbon source L-Lactate (C) +0.0 +0.1 +0.1 -0.5 -0.4
pH Minimal media pH9 -0.2 -0.2 +0.3 -0.6 +0.0
stress Thallium(I) acetate 0.016 mg/ml -0.0 +0.3 -0.1 -0.5 -0.4
nitrogen source nitrate (N) +0.0 -0.5 +0.2 +0.1 -0.3
stress Cisplatin 0.006 mg/ml +0.2 +0.1 +0.2 -1.2 +0.3
carbon source L-Serine (C) +0.3 -0.1 -0.1 +0.2 -0.6
stress Rifampicin 0.005 mg/ml +0.1 +0.4 +0.1 -0.6 -0.2
denitrifying Nitrate reduction, replicate B -0.1 -0.6 +0.2 +0.2 +0.1
survival 4C survival; 672 hrs -0.4 -0.3 -0.1 +0.2 +0.3
stress copper (II) chloride 2.5 mM +0.2 +0.2 -0.0 -0.8 +0.3
nitrogen source Gly-DL-Asp (N) -0.3 +0.2 +0.4 -0.1 -0.2
carbon source acetate (C) +0.2 -0.8 +0.2 +0.3 +0.3
stress nitrate 200 mM -0.2 -0.6 +0.1 +0.4 +0.5
carbon source L-Citrulline +0.5 +0.3 -0.3 +0.1 -0.3
motility outer cut, LB soft agar motility assay +0.5 -0.3 +0.5 +0.0 -0.3
carbon source L-Ornithine -0.2 -0.2 +0.5 +0.0 +0.3
carbon source D-Glucose +0.1 -0.0 +0.1 +0.7 -0.2
carbon source Ethanol (C) +0.4 +0.3 +0.2 +0.2 -0.3
carbon source L-Tryptophan (C) -0.2 -0.1 +0.4 +0.6 +0.1
stress Doxycycline hyclate 0.0006 mg/ml +0.5 +0.2 -0.4 +0.1 +0.7
carbon source L-Ornithine -0.1 +0.5 -0.1 +0.4 +0.4
stress acetate 68 mM +0.1 +0.7 +0.2 +0.2 +0.2
carbon source L-Citrulline +0.2 +0.5 +0.0 +0.5 +0.5
carbon source L-Citrulline +0.3 +0.8 -0.1 +0.4 +0.5
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