Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_01430 and AO353_01435 overlap by 4 nucleotidesAO353_01435 and AO353_01440 overlap by 1 nucleotidesAO353_01440 and AO353_01445 overlap by 4 nucleotidesAO353_01445 and AO353_01450 are separated by 24 nucleotides AO353_01430: AO353_01430 - UDP-N-acetylenolpyruvoylglucosamine reductase, at 308,605 to 309,624 _01430 AO353_01435: AO353_01435 - protein tyrosine phosphatase, at 309,621 to 310,085 _01435 AO353_01440: AO353_01440 - 3-deoxy-manno-octulosonate cytidylyltransferase, at 310,085 to 310,849 _01440 AO353_01445: AO353_01445 - hypothetical protein, at 310,846 to 311,031 _01445 AO353_01450: AO353_01450 - tetraacyldisaccharide 4'-kinase, at 311,056 to 312,066 _01450
Group Condition AO353_01430 AO353_01435 AO353_01440 AO353_01445 AO353_01450
motility outer cut, LB soft agar motility assay N.D. -1.5 N.D. N.D. N.D.
anaerobic Anaerobic, acetate donor; nitrate and iron N.D. -1.5 N.D. N.D. N.D.
stress Doxycycline hyclate 0.0006 mg/ml N.D. -1.4 N.D. N.D. N.D.
nitrogen source Gly-Glu (N) N.D. -1.0 N.D. N.D. N.D.
stress Cholin acetate 10 mM N.D. -0.9 N.D. N.D. N.D.
carbon source Putrescine (C) N.D. -0.8 N.D. N.D. N.D.
carbon source L-Tryptophan (C) N.D. -0.8 N.D. N.D. N.D.
lb LB N.D. -0.7 N.D. N.D. N.D.
temperature LB 20C N.D. -0.7 N.D. N.D. N.D.
pH Minimal media pH9 N.D. -0.7 N.D. N.D. N.D.
lb LB N.D. -0.6 N.D. N.D. N.D.
stress Sisomicin 0.008 mg/ml N.D. -0.6 N.D. N.D. N.D.
stress Benzalkonium Chloride 0.012 mg/ml N.D. -0.6 N.D. N.D. N.D.
stress Doxycycline hyclate 0.0002 mg/ml N.D. -0.6 N.D. N.D. N.D.
carbon source D-Trehalose (C) N.D. -0.6 N.D. N.D. N.D.
nitrogen source L-Lysine (N) N.D. -0.6 N.D. N.D. N.D.
nitrogen source Parabanic Acid (N) N.D. -0.6 N.D. N.D. N.D.
carbon source L-Valine (C) N.D. -0.6 N.D. N.D. N.D.
stress A22 0.01 mg/ml N.D. -0.6 N.D. N.D. N.D.
carbon source pyruvate (C) N.D. +0.6 N.D. N.D. N.D.
carbon source L-Serine (C) N.D. +0.6 N.D. N.D. N.D.
carbon source m-Inositol (C) N.D. +0.6 N.D. N.D. N.D.
carbon source D-Lactate (C) N.D. +0.6 N.D. N.D. N.D.
carbon source D,L-Lactate (C) N.D. +0.7 N.D. N.D. N.D.
carbon source D-Glucose (C) N.D. +0.7 N.D. N.D. N.D.
stress methylglyoxal 0.009 vol% N.D. +0.8 N.D. N.D. N.D.
carbon source L-Ornithine N.D. +0.8 N.D. N.D. N.D.
carbon source D-Glucose N.D. +0.8 N.D. N.D. N.D.
stress Nickel (II) chloride 0.625 mM N.D. +0.8 N.D. N.D. N.D.
carbon source acetate (C) N.D. +1.1 N.D. N.D. N.D.
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