Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_01175 and AO353_01180 are separated by 12 nucleotidesAO353_01180 and AO353_01185 are separated by 302 nucleotidesAO353_01185 and AO353_01190 are separated by 211 nucleotidesAO353_01190 and AO353_01195 are separated by 137 nucleotides AO353_01175: AO353_01175 - hypothetical protein, at 260,151 to 261,101 _01175 AO353_01180: AO353_01180 - hypothetical protein, at 261,114 to 262,523 _01180 AO353_01185: AO353_01185 - superfamily II DNA/RNA helicase, SNF2 family protein, at 262,826 to 263,167 _01185 AO353_01190: AO353_01190 - hypothetical protein, at 263,379 to 263,615 _01190 AO353_01195: AO353_01195 - hypothetical protein, at 263,753 to 264,358 _01195
Group Condition AO353_01175 AO353_01180 AO353_01185 AO353_01190 AO353_01195
pH Minimal media pH9 -0.1 -0.1 +0.3 -4.4 -0.2
anaerobic Anaerobic, acetate donor; nitrate and iron -0.1 +0.5 -0.1 -3.0 -0.3
nitrogen source L-Serine (N) -0.1 +0.0 -0.5 -1.5 -0.0
stress Doxycycline hyclate 0.0006 mg/ml -0.4 -0.1 +0.3 -2.2 +0.5
motility outer cut, LB soft agar motility assay -0.0 +0.3 +0.4 -2.6 -0.0
pH Minimal media pH9 -0.2 -0.1 +0.1 -1.1 -0.4
carbon source L-Ornithine -0.2 +0.3 +0.5 -2.2 -0.0
stress Sisomicin 0.008 mg/ml -0.2 +0.1 -0.1 -1.1 -0.3
stress Rifampicin 0.005 mg/ml +0.1 +0.0 -0.1 -1.3 -0.3
carbon source Ethanol (C) +0.2 +0.0 -0.1 -1.6 -0.1
nitrogen source Gly-Glu (N) -0.1 -0.0 -0.2 -1.3 +0.1
stress Paraquat dichloride 0.032 mg/mL -0.0 -0.0 +0.0 -1.6 +0.2
carbon source succinate (C) +0.2 -0.0 +0.2 -1.7 -0.0
nitrogen source Thymine (N) -0.3 +0.1 -0.1 -1.2 +0.2
carbon source butyrate (C) +0.0 +0.0 -0.3 -1.1 +0.2
nitrogen source Gly-DL-Asp (N) -0.1 +0.2 -0.1 -1.3 +0.4
stress Doxycycline hyclate 0.0002 mg/ml +0.1 -0.2 +0.3 -1.0 +0.0
carbon source L-Tryptophan (C) -0.0 +0.2 +0.2 -1.2 +0.0
carbon source propionate (C) +0.1 +0.1 +0.5 -1.4 +0.1
stress Cobalt chloride 0.32 mM +0.3 +0.1 +0.3 -0.9 -0.4
stress Cisplatin 0.006 mg/ml -0.3 -0.1 -0.3 +1.0 -0.3
stress nitrate 200 mM +0.2 +0.2 -0.5 +0.6 -0.1
stress A22 0.002 mg/ml +0.1 -0.1 -0.0 +0.9 -0.3
stress 1-ethyl-3-methylimidazolium acetate 30 mM +0.1 +0.0 +0.3 +0.7 -0.4
carbon source L-Citrulline +0.1 +0.2 +0.6 +0.7 -0.4
carbon source L-Ornithine +0.0 -0.0 -0.2 +1.3 +0.2
carbon source L-Citrulline +0.1 +0.2 -0.2 +1.0 +0.2
pH Minimal media pH7 -0.2 +0.1 +0.3 +1.3 -0.1
stress Thallium(I) acetate 0.016 mg/ml +0.3 +0.0 -0.0 +1.3 -0.1
temperature LB 20C +0.1 +0.0 +0.3 +1.2 +0.3
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