Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 216 experiments or choose conditions or try the comparative fitness browser

500 ntAO353_00885 and AO353_00890 are separated by 54 nucleotidesAO353_00890 and AO353_00895 are separated by 200 nucleotidesAO353_00895 and AO353_00900 are separated by 67 nucleotidesAO353_00900 and AO353_00905 overlap by 4 nucleotides AO353_00885: AO353_00885 - 3-methylitaconate isomerase, at 200,114 to 201,304 _00885 AO353_00890: AO353_00890 - Fe/S-dependent 2-methylisocitrate dehydratase AcnD, at 201,359 to 203,953 _00890 AO353_00895: AO353_00895 - 2-methylcitrate synthase, at 204,154 to 205,281 _00895 AO353_00900: AO353_00900 - 2-methylisocitrate lyase, at 205,349 to 206,242 _00900 AO353_00905: AO353_00905 - GntR family transcriptional regulator, at 206,239 to 206,961 _00905
Group Condition AO353_00885 AO353_00890 AO353_00895 AO353_00900 AO353_00905
carbon source propionate (C) -3.6 -2.9 -4.2 -4.2 -3.5
carbon source L-Isoleucine (C) -3.2 -3.7 -3.4 -3.2 -2.5
carbon source propionate (C) -2.1 -2.1 -3.6 -3.1 -3.3
carbon source L-Valine (C) -2.3 -3.2 -3.5 -3.1 -2.0
nitrogen source Thymine (N) -1.2 -1.8 -0.4 -1.2 -0.7
nitrogen source L-Threonine (N) -1.8 -1.7 +0.2 -2.0 -0.1
motility outer cut, LB soft agar motility assay -1.1 -1.8 -0.9 +0.1 -0.1
carbon source L-Leucine (C) +0.0 -2.0 -1.6 -0.2 -0.1
nitrogen source L-Threonine (N) -0.5 -1.4 +0.2 -1.8 -0.1
carbon source D-Trehalose (C) -0.9 -1.0 -0.4 -1.3 -0.1
carbon source D-Trehalose (C) -0.8 -0.6 -0.7 -1.5 +0.1
carbon source L-Citrulline (C) -0.8 -2.6 +0.7 -0.4 -0.1
motility outer cut, LB soft agar motility assay -0.0 -1.3 -1.0 +0.2 -0.8
carbon source D-Alanine (C) +0.2 -1.8 -1.3 -0.2 +0.1
carbon source L-Tryptophan (C) +0.3 -1.2 +0.1 -0.1 -1.1
stress Sisomicin 0.008 mg/ml -1.1 -1.1 +0.2 -1.1 +1.1
anaerobic Anaerobic, acetate donor; nitrate and iron -1.0 -0.4 +0.2 -1.1 +0.5
stress Doxycycline hyclate 0.0006 mg/ml +0.5 -0.5 +0.1 -0.2 +1.8
survival 4C survival; 672 hrs +1.2 +1.0 +1.5 -0.9 -0.5
carbon source L-Citrulline +0.4 +0.3 -0.8 +1.9 +0.8
carbon source L-Serine (C) +0.3 +1.5 +0.6 +0.7 -0.1
carbon source L-Citrulline +0.6 +0.5 -0.1 +2.0 +0.6
carbon source L-Citrulline +1.0 +0.5 +0.3 +2.2 -0.0
carbon source L-Citrulline +1.1 +0.3 +0.4 +1.9 +1.1
carbon source D-Glucose +1.6 +1.5 -0.4 +2.0 +0.7
carbon source L-Ornithine +1.4 +2.1 -0.5 +2.7 +0.1
carbon source L-Ornithine +1.4 +1.5 -0.2 +2.6 +0.5
carbon source D-Glucose +1.5 +1.9 +0.2 +1.9 +0.5
carbon source L-Ornithine +1.6 +1.8 -0.7 +2.9 +0.9
carbon source L-Ornithine +1.7 +2.7 -0.3 +3.7 +1.8
remove
AO353_00885
plot
remove
AO353_00890
plot
remove
AO353_00895
remove
AO353_00900
plot
remove
AO353_00905
plot