Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_00690 and AO353_00695 are separated by 3 nucleotidesAO353_00695 and AO353_00700 are separated by 490 nucleotidesAO353_00700 and AO353_00705 are separated by 136 nucleotidesAO353_00705 and AO353_00710 are separated by 416 nucleotides AO353_00690: AO353_00690 - amino acid ABC transporter substrate-binding protein, at 146,580 to 147,338 _00690 AO353_00695: AO353_00695 - diguanylate cyclase, at 147,342 to 149,042 _00695 AO353_00700: AO353_00700 - Cro/Cl family transcriptional regulator, at 149,533 to 149,847 _00700 AO353_00705: AO353_00705 - drug:proton antiporter, at 149,984 to 150,352 _00705 AO353_00710: AO353_00710 - aromatic ring-opening dioxygenase LigA, at 150,769 to 153,126 _00710
Group Condition AO353_00690 AO353_00695 AO353_00700 AO353_00705 AO353_00710
carbon source L-Leucine (C) -1.0 +0.2 -0.5 -1.0 N.D.
motility outer cut, LB soft agar motility assay +0.3 +0.9 -1.8 -1.3 N.D.
stress Doxycycline hyclate 0.0006 mg/ml -0.4 -0.5 +0.1 -0.5 N.D.
carbon source D-Glucosamine Hydrochloride (C) -0.1 +0.3 -0.9 -0.3 N.D.
nitrogen source Urea (N) +0.1 +0.3 -1.1 -0.2 N.D.
carbon source L-Valine (C) +0.2 +0.3 -0.7 -0.5 N.D.
stress acetate 68 mM -0.1 -1.2 +0.8 -0.0 N.D.
stress Cholin acetate 10 mM -0.3 -0.8 +0.8 -0.2 N.D.
lb LB -0.2 -0.7 +0.6 -0.2 N.D.
anaerobic Anaerobic, acetate donor; nitrate and iron +0.8 -0.8 -0.9 +0.4 N.D.
motility outer cut, LB soft agar motility assay -0.0 +1.5 -1.1 -0.7 N.D.
carbon source L-Alanine (C) +0.2 +0.4 -0.4 -0.4 N.D.
stress 1-ethyl-3-methylimidazolium acetate 30 mM -0.5 -0.6 +1.0 -0.1 N.D.
stress Cholin acetate 38 mM -0.6 -0.7 +1.3 -0.2 N.D.
survival 4C survival; 360 hrs -0.4 -0.4 +0.6 +0.1 N.D.
stress acetate 34 mM -0.3 -0.7 +1.0 -0.2 N.D.
stress 1-ethyl-3-methylimidazolium acetate 20 mM -0.4 -0.6 +1.0 -0.0 N.D.
stress Thallium(I) acetate 0.016 mg/ml +0.7 +0.2 -1.1 +0.2 N.D.
stress acetate 17 mM -0.2 -0.6 +1.0 -0.2 N.D.
carbon source L-Ornithine +0.3 +0.5 -0.3 -0.4 N.D.
carbon source L-Citrulline +0.5 +0.2 -0.1 -0.6 N.D.
stress Cholin acetate 19 mM -0.3 -0.7 +0.9 +0.3 N.D.
stress Cisplatin 0.006 mg/ml +0.5 -0.4 -0.7 +0.9 N.D.
stress 1-ethyl-3-methylimidazolium acetate 15 mM -0.5 -0.5 +1.2 +0.1 N.D.
lb LB +0.3 -0.4 +0.3 +0.4 N.D.
motility outer cut, LB soft agar motility assay +0.6 +1.5 -0.6 -0.9 N.D.
stress Cobalt chloride 0.16 mM +0.5 -0.3 +0.5 +0.2 N.D.
survival 4C survival; 672 hrs -1.1 -1.1 +3.4 +0.6 N.D.
stress nitrate 200 mM +0.0 +2.8 -0.3 -0.5 N.D.
stress perchlorate 75 mM +0.3 +1.5 +0.1 +0.1 N.D.
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