Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_00565 and AO353_00570 are separated by 124 nucleotidesAO353_00570 and AO353_00575 are separated by 101 nucleotidesAO353_00575 and AO353_00580 are separated by 204 nucleotidesAO353_00580 and AO353_00585 are separated by 98 nucleotides AO353_00565: AO353_00565 - aconitate hydratase, at 118,133 to 120,883 _00565 AO353_00570: AO353_00570 - CAAX protease, at 121,008 to 121,799 _00570 AO353_00575: AO353_00575 - chemotaxis protein, at 121,901 to 123,466 _00575 AO353_00580: AO353_00580 - alpha/beta hydrolase, at 123,671 to 124,348 _00580 AO353_00585: AO353_00585 - cytochrome C oxidase Cbb3, at 124,447 to 125,871 _00585
Group Condition AO353_00565 AO353_00570 AO353_00575 AO353_00580 AO353_00585
motility outer cut, LB soft agar motility assay +0.2 +0.1 -2.7 -0.4 -1.1
pH Minimal media pH6 -0.0 -0.2 +0.2 -0.2 -1.9
pH Minimal media pH8 +0.1 +0.0 +0.1 -0.3 -1.5
stress acetate 68 mM +0.1 -0.3 -0.6 -0.4 -0.5
survival 4C survival; 672 hrs +0.0 -0.9 -0.1 -0.0 -0.4
motility outer cut, LB soft agar motility assay +0.3 -0.1 -1.1 -0.1 -0.4
survival 4C survival; 192 hrs +0.2 +0.0 -0.1 -0.1 -1.4
stress Choline chloride 358 mM +0.1 -0.2 -0.2 -0.5 -0.3
nitrogen source L-Glutamine (N) -0.1 +0.1 +0.1 -0.3 -0.9
nitrogen source L-Glutamic (N) -0.0 +0.1 +0.1 -0.3 -0.8
nitrogen source L-Histidine (N) +0.0 -0.0 +0.1 -0.3 -0.8
nitrogen source L-Arginine (N) +0.1 -0.3 +0.2 +0.1 -1.0
nitrogen source L-Arginine (N) +0.1 -0.2 +0.1 -0.2 -0.7
stress Cisplatin 0.006 mg/ml -0.3 -0.3 +0.5 -0.4 -0.2
nitrogen source L-Glutamine (N) +0.1 +0.1 +0.2 -0.2 -1.1
motility outer cut, LB soft agar motility assay +0.4 +0.4 -1.0 -0.0 -0.5
stress Nalidixic 0.004 mg/ml +0.1 +0.2 -0.3 -0.4 -0.3
survival 4C survival; 360 hrs +0.1 +0.1 +0.0 -0.1 -0.8
pH Minimal media pH6 -0.0 +0.0 +0.4 -0.3 -0.7
carbon source L-Histidine (C) +0.0 +0.1 +0.2 +0.0 -1.0
stress benzoic 0.58 mg/ml -0.0 +0.4 -0.1 -0.4 -0.3
stress Sisomicin 0.008 mg/ml -0.0 -0.2 +0.1 -0.5 +0.3
stress Cisplatin 0.006 mg/ml -0.2 +0.4 +0.1 -0.3 -0.2
stress Lomefloxacin 0.001 mM +0.1 +0.5 +0.4 -0.5 -0.2
carbon source L-Citrulline +0.3 +0.5 +0.0 +0.2 -0.4
carbon source L-Ornithine +0.2 +0.4 +0.0 +0.3 -0.2
carbon source L-Ornithine +0.5 -0.1 +0.5 +0.2 -0.2
nitrogen source L-tyrosine (N) +0.1 +0.4 +0.2 +0.4 -0.1
carbon source acetate (C) +0.2 +0.7 -0.3 +0.0 +0.4
carbon source L-Isoleucine (C) +0.1 +0.5 +0.1 +0.3 +0.1
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