Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_00540 and AO353_00545 are separated by 137 nucleotidesAO353_00545 and AO353_00550 are separated by 282 nucleotidesAO353_00550 and AO353_00555 are separated by 48 nucleotidesAO353_00555 and AO353_00560 are separated by 200 nucleotides AO353_00540: AO353_00540 - multifunctional fatty acid oxidation complex subunit alpha, at 113,185 to 113,364 _00540 AO353_00545: AO353_00545 - erythronate-4-phosphate dehydrogenase, at 113,502 to 114,644 _00545 AO353_00550: AO353_00550 - MATE family efflux transporter, at 114,927 to 116,336 _00550 AO353_00555: AO353_00555 - sulfurtransferase, at 116,385 to 116,636 _00555 AO353_00560: AO353_00560 - 23S rRNA methyltransferase, at 116,837 to 117,910 _00560
Group Condition AO353_00540 AO353_00545 AO353_00550 AO353_00555 AO353_00560
motility outer cut, LB soft agar motility assay -2.7 N.D. -0.0 N.D. +0.1
carbon source L-Citrulline -0.7 N.D. -0.1 N.D. -1.6
carbon source L-Ornithine -1.5 N.D. +0.0 N.D. -0.5
pH Minimal media pH9 -1.9 N.D. -0.0 N.D. +0.1
carbon source L-Ornithine -0.8 N.D. +0.0 N.D. -0.7
carbon source L-Citrulline -1.1 N.D. +0.2 N.D. -0.5
carbon source L-Citrulline -1.2 N.D. +0.2 N.D. -0.3
nitrogen source Uridine (N) -1.0 N.D. +0.1 N.D. -0.4
stress Benzalkonium Chloride 0.012 mg/ml +0.7 N.D. -1.1 N.D. -0.8
carbon source L-Citrulline -0.9 N.D. -0.2 N.D. -0.0
carbon source m-Inositol (C) -0.9 N.D. +0.1 N.D. -0.4
stress Doxycycline hyclate 0.0006 mg/ml -0.4 N.D. -0.3 N.D. -0.4
stress methylglyoxal 0.008 vol% -0.9 N.D. -0.0 N.D. -0.2
denitrifying Nitrate reduction, replicate B -0.4 N.D. -0.4 N.D. -0.2
carbon source casaminos (C) -0.7 N.D. +0.1 N.D. -0.3
pH Minimal media pH9 -0.6 N.D. -0.4 N.D. +0.1
carbon source D-Glucose +0.1 N.D. +0.1 N.D. -0.9
carbon source L-Isoleucine (C) -0.9 N.D. -0.1 N.D. +0.4
stress Benzalkonium Chloride 0.01 mg/ml +0.2 N.D. -0.7 N.D. +0.1
pH Minimal media pH7 -0.6 N.D. +0.0 N.D. +0.4
stress Fusidic 0.125 mg/ml +0.8 N.D. -0.4 N.D. -0.4
carbon source m-Inositol (C) +0.6 N.D. +0.0 N.D. -0.6
carbon source D-Serine (C) -0.4 N.D. +0.2 N.D. +0.6
stress Lomefloxacin 0.001 mM +0.6 N.D. -0.3 N.D. +0.3
stress Thallium(I) acetate 0.008 mg/ml -0.2 N.D. +0.0 N.D. +0.9
anaerobic Anaerobic, acetate donor; nitrate and iron +1.1 N.D. +0.1 N.D. -0.1
stress Thallium(I) acetate 0.008 mg/ml +0.6 N.D. -0.1 N.D. +0.7
stress Thallium(I) acetate 0.016 mg/ml +0.6 N.D. -0.1 N.D. +0.8
lb LB +1.4 N.D. +0.1 N.D. +0.1
stress Thallium(I) acetate 0.016 mg/ml +1.2 N.D. -0.1 N.D. +1.0
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