Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_00490 and AO353_00495 are separated by 143 nucleotidesAO353_00495 and AO353_00500 are separated by 114 nucleotidesAO353_00500 and AO353_00505 are separated by 100 nucleotidesAO353_00505 and AO353_00510 are separated by 30 nucleotides AO353_00490: AO353_00490 - PasA protein, at 98,158 to 98,682 _00490 AO353_00495: AO353_00495 - DNA topoisomerase I, at 98,826 to 101,447 _00495 AO353_00500: AO353_00500 - TonB box-like protein, at 101,562 to 101,798 _00500 AO353_00505: AO353_00505 - 3-ketoacyl-CoA thiolase, at 101,899 to 103,074 _00505 AO353_00510: AO353_00510 - multifunctional fatty acid oxidation complex subunit alpha, at 103,105 to 105,252 _00510
Group Condition AO353_00490 AO353_00495 AO353_00500 AO353_00505 AO353_00510
pH Minimal media pH9 -1.2 -4.9 -0.5 -2.7 -3.0
carbon source Tween 20 (C) -0.7 -2.7 -0.4 -3.5 -3.5
carbon source Tween 20 (C) -1.0 -2.2 -0.5 -3.6 -3.4
carbon source L-Tryptophan (C) -1.1 -3.6 -0.6 -2.3 -2.6
pH Minimal media pH9 -1.4 -3.3 -0.0 -2.4 -2.3
motility outer cut, LB soft agar motility assay -0.5 -3.6 -0.4 -1.6 -1.7
motility outer cut, LB soft agar motility assay -0.9 -3.1 -0.8 -0.5 -1.7
carbon source L-Citrulline (C) +0.1 -2.3 -0.6 -0.9 -2.6
motility outer cut, LB soft agar motility assay +0.1 -3.4 +0.1 -1.5 -1.4
carbon source L-Leucine (C) -1.0 +0.4 +0.3 -2.2 -3.2
carbon source L-Valine (C) -0.9 +0.3 -0.1 -2.7 -2.3
carbon source L-Arginine (C) -0.5 -1.8 +0.1 -1.3 -1.9
stress Spectinomycin 0.15 mg/ml -0.4 -2.5 +0.1 -0.9 -1.6
survival 4C survival; 360 hrs -0.3 -3.0 +0.1 -0.7 -1.3
carbon source L-Alanine (C) -2.8 -2.4 +0.1 +0.3 -0.1
nitrogen source Parabanic Acid (N) -0.8 -2.9 -0.9 -0.4 +0.5
survival 4C survival; 672 hrs -0.2 -2.9 +2.5 -1.8 -1.5
carbon source Trisodium citrate (C) -3.5 +1.5 -0.2 -0.6 -0.8
stress Cisplatin 0.006 mg/ml +1.3 -2.1 +0.2 -1.0 -1.4
carbon source Trisodium citrate (C) -2.9 +1.3 -0.3 -0.5 -0.5
stress Doxycycline hyclate 0.0002 mg/ml +0.5 -3.2 -0.8 +1.0 +0.9
stress Sisomicin 0.008 mg/ml +0.1 +4.8 -0.9 -2.4 -2.5
stress Lomefloxacin 0.001 mM -0.5 -2.6 -0.4 +1.1 +2.1
stress Rifampicin 0.005 mg/ml +0.2 -3.0 +0.5 +0.5 +1.8
stress Tetracycline 0.0016 mg/ml -0.6 -1.7 +0.5 +1.2 +2.0
stress Doxycycline hyclate 0.0006 mg/ml +0.9 -1.9 -0.2 +1.6 +2.0
carbon source acetate (C) -0.8 +4.1 +1.3 +0.5 +0.3
stress Benzalkonium Chloride 0.01 mg/ml +0.7 -0.0 +0.2 +2.7 +2.5
stress Paraquat dichloride 0.032 mg/mL +0.3 +5.6 +0.0 +0.7 +1.0
stress Benzalkonium Chloride 0.012 mg/ml +0.8 -0.4 +0.3 +4.0 +3.8
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