Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_00340 and AO353_00345 are separated by 246 nucleotidesAO353_00345 and AO353_00350 are separated by 61 nucleotidesAO353_00350 and AO353_00355 are separated by 155 nucleotidesAO353_00355 and AO353_00360 overlap by 1 nucleotides AO353_00340: AO353_00340 - chromosome partitioning protein ParA, at 62,086 to 62,349 _00340 AO353_00345: AO353_00345 - NADPH-dependent 7-cyano-7-deazaguanine reductase, at 62,596 to 63,426 _00345 AO353_00350: AO353_00350 - copper-binding protein, at 63,488 to 64,045 _00350 AO353_00355: AO353_00355 - transcriptional regulator, at 64,201 to 64,881 _00355 AO353_00360: AO353_00360 - ATPase, at 64,881 to 66,242 _00360
Group Condition AO353_00340 AO353_00345 AO353_00350 AO353_00355 AO353_00360
stress copper (II) chloride 2.5 mM N.D. -0.3 -0.3 -4.3 +0.5
stress copper (II) chloride 2.5 mM N.D. -0.4 +0.4 -4.1 +0.9
carbon source pyruvate (C) N.D. -0.8 -0.0 -2.2 -0.1
carbon source L-Leucine (C) N.D. -0.6 -0.2 -1.6 -0.4
nitrogen source Parabanic Acid (N) N.D. -0.0 -0.7 +0.0 -2.1
carbon source acetate (C) N.D. -1.5 +0.1 -0.4 -0.5
carbon source L-Citrulline N.D. -0.3 -0.1 -0.5 -1.1
stress Benzalkonium Chloride 0.01 mg/ml N.D. -0.1 +0.5 -0.9 -1.3
carbon source L-Valine (C) N.D. +0.9 +0.2 -2.9 -0.0
stress 1-ethyl-3-methylimidazolium acetate 15 mM N.D. -0.3 +0.3 -1.2 -0.2
stress Paraquat dichloride 0.032 mg/mL N.D. -0.8 +0.3 -1.2 +0.3
nitrogen source L-Histidine (N) N.D. -0.4 -0.0 -1.2 +0.3
stress Benzalkonium Chloride 0.012 mg/ml N.D. -0.2 +0.5 -0.0 -1.6
stress Gentamicin 0.006 mg/ml N.D. -0.7 -0.1 -0.9 +0.5
stress Cobalt chloride 0.16 mM N.D. -0.6 +0.3 -1.1 +0.2
nitrogen source Urea (N) N.D. -0.0 -0.6 +0.6 -1.1
stress Spectinomycin 0.2 mg/ml N.D. -0.5 +0.6 -0.0 -1.0
stress Sisomicin 0.008 mg/ml N.D. -1.4 -0.3 +0.3 +0.9
stress nitrate 200 mM N.D. +0.6 +0.3 -1.1 -0.3
carbon source m-Inositol (C) N.D. +0.6 -0.1 -1.2 +0.4
pH Minimal media pH9 N.D. +0.4 -0.9 +0.8 -0.4
carbon source propionate (C) N.D. +0.4 +0.2 +0.4 -1.0
carbon source butyrate (C) N.D. +0.5 +0.3 -1.0 +0.5
anaerobic Anaerobic, acetate donor; nitrate and iron N.D. -0.2 -0.9 +1.2 +0.5
stress Tetracycline 0.0016 mg/ml N.D. +1.4 -0.2 +0.0 -0.5
stress Doxycycline hyclate 0.0006 mg/ml N.D. +1.1 +0.1 -0.8 +0.4
survival 4C survival; 672 hrs N.D. -0.4 +0.3 +1.2 -0.2
stress Cisplatin 0.006 mg/ml N.D. +0.3 +0.8 +0.8 -0.5
carbon source Uridine (C) N.D. +0.4 +0.4 +0.3 +0.9
stress methylglyoxal 0.009 vol% N.D. +2.0 +0.2 +0.3 -0.0
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