Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS23475	ABZR87_RS23480	ABZR87_RS23485	ABZR87_RS23490	ABZR87_RS23495
carbon source	Lauric (C)	-3.6	-0.2	-0.2	N.D.	+0.2
carbon source	Lauric (C)	-3.1	-0.1	-0.1	N.D.	+0.1
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.5	-0.4	-0.7	N.D.	-0.9
root	root sample 5; outgrowth in LB	+0.5	-0.3	-0.9	N.D.	-1.4
carbon source	4-Hydroxybenzoic Acid (C)	-0.0	-0.3	+0.2	N.D.	-1.7
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.1	-0.5	-0.4	N.D.	-0.8
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.6	+0.1	-0.5	N.D.	-0.5
carbon source	L-Glutamic (C)	-0.7	-0.2	+0.1	N.D.	-0.7
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.6	+0.0	-0.4	N.D.	-0.3
carbon source	Octanoic (C)	+0.2	+0.1	-0.3	N.D.	-1.2
nitrogen source	nitrogen source nitrite 0.5mM	+0.0	+0.2	-0.5	N.D.	-1.0
no_plant_rhizosphere	no_plant_rhizosphere sample 2; outgrowth in LB	-0.6	-0.0	+0.0	N.D.	-0.6
nitrogen source	nitrogen source nitrate 20mM	-0.4	+0.1	-0.3	N.D.	-0.5
soil	soil sample 9; outgrowth in LB	-0.9	+0.1	-0.1	N.D.	-0.1
no_plant_soil	no_plant_soil sample 3; outgrowth in LB	-1.2	-0.1	+0.1	N.D.	+0.1
rhizosphere	rhizosphere sample 3; outgrowth in LB	-0.6	-0.8	+0.1	N.D.	+0.4
rhizosphere	rhizosphere sample 9; outgrowth in LB	-0.3	-0.2	-0.5	N.D.	+0.4
root	root sample 6; outgrowth in LB	+0.3	+0.1	-0.0	N.D.	-1.0
carbon source	Valeric (C)	-0.6	+0.1	-0.3	N.D.	+0.3
root	root EcoFAB sample 1; outgrowth in LB	+0.3	-0.6	+0.2	N.D.	-0.5
carbon source	Hexanoic (C)	-0.3	-0.2	-0.4	N.D.	+0.5
carbon source	Lauric (C)	+0.1	+0.1	-0.9	N.D.	+0.3
no_plant_rhizosphere	no_plant_rhizosphere sample 3; outgrowth in LB	-0.6	+0.2	+0.4	N.D.	-0.4
no_plant_rhizosphere	no_plant_rhizosphere sample 1; outgrowth in LB	-1.0	+0.0	+0.3	N.D.	+0.4
carbon source	Sebacic (C)	+0.1	+0.0	-0.9	N.D.	+0.7
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.1	-0.2	-0.4	N.D.	+0.9
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.5	+0.1	-0.5	N.D.	+0.3
micoeukaryotes	Acanthamoeba sp., muxed culture-1	+0.4	+0.2	+0.3	N.D.	+0.4
phage	Ra3_1	-0.0	+0.4	+0.8	N.D.	+0.1
carbon source	Azelaic (C)	+0.3	+0.5	+0.1	N.D.	+0.5