Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

Or view all 129 experiments or choose conditions or try the comparative fitness browser

Group	Condition	ABZR87_RS23230	ABZR87_RS23235	ABZR87_RS23240	ABZR87_RS23245	ABZR87_RS23250
carbon source	Octanoic (C)	-0.8	-1.9	+0.2	-0.0	-0.3
in planta	Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)	-2.1	+0.4	-0.2	-0.1	-0.1
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.5	-0.5	+0.1	+0.0	-1.2
carbon source	D-Glucose (C)	-1.7	+0.3	-0.2	-0.0	-0.5
carbon source	Azelaic (C)	-0.6	+0.2	+0.2	-0.1	-1.6
carbon source	Carbon source D-Glucose 10 mM	-1.8	+0.5	-0.1	-0.0	-0.2
carbon source	D-Glucose (C)	-1.7	+0.5	-0.1	-0.0	-0.2
nitrogen source	nitrogen source nitrate 5mM	-1.7	+0.4	-0.0	+0.0	-0.2
nitrogen source	nitrogen source Ammonium chloride 20mM	-1.8	+0.9	-0.1	+0.0	-0.4
nitrogen source	nitrogen source nitrate 20mM	-1.5	+0.6	-0.1	+0.0	-0.1
nitrogen source	nitrogen source Ammonium chloride 20mM	-1.8	+0.7	-0.1	+0.1	+0.0
carbon source	Octanoic (C)	-0.5	-1.2	+0.1	+0.0	+1.0
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.2	-1.3	-0.1	+0.0	+1.0
root	root EcoFAB sample 2; outgrowth in LB	-0.4	+1.1	-0.0	+0.1	-1.2
rhizosphere	rhizosphere EcoFAB sample 1; outgrowth in LB	+0.4	+1.7	-0.2	+0.1	-1.8
rhizosphere	rhizosphere sample 3; outgrowth in LB	-0.8	+2.4	+0.1	-0.0	-0.7
root	root sample 4; outgrowth in LB	-0.2	+2.1	-0.2	+0.1	-0.6
root	root EcoFAB sample 1; outgrowth in LB	+0.5	+1.9	-0.5	+0.0	-0.8
root	root sample 6; outgrowth in LB	-0.4	+2.3	-0.1	+0.1	+0.0
rhizosphere	rhizosphere sample 6; outgrowth in LB	-0.1	+1.9	-0.2	+0.0	+0.4
carbon source	D-Xylose (C)	+1.2	+0.9	+0.1	-0.0	-0.1
carbon source	D-Xylose (C)	+1.1	+1.1	-0.0	-0.0	+0.2
root	root sample 5; outgrowth in LB	-0.8	+1.6	-0.1	-0.1	+2.2
rhizosphere	rhizosphere sample 2; outgrowth in LB	-0.1	+2.6	-0.3	-0.1	+0.7
rhizosphere	rhizosphere sample 9; outgrowth in LB	-0.0	+2.4	-0.3	+0.1	+0.9
carbon source	succinate (C)	+1.4	+1.4	+0.1	-0.0	+0.1
carbon source	acetate (C)	+1.6	+2.5	+0.0	-0.0	-0.4
rhizosphere	rhizosphere sample 7; outgrowth in LB	-0.0	+3.1	-0.0	+0.0	+0.7
carbon source	succinate (C)	+1.8	+1.8	+0.1	-0.0	+0.3
carbon source	acetate (C)	+1.9	+2.9	-0.0	-0.0	+0.1