Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Ralstonia sp. UNC404CL21Col
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 129 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
ABZR87_RS22950 and ABZR87_RS22955 overlap by 4 nucleotides
ABZR87_RS22955 and ABZR87_RS22960 overlap by 4 nucleotides
ABZR87_RS22960 and ABZR87_RS22965 are separated by 8 nucleotides
ABZR87_RS22965 and ABZR87_RS22970 are separated by 474 nucleotides
ABZR87_RS22950: ABZR87_RS22950 - cytochrome c oxidase subunit I, at 1,507,465 to 1,509,255
_RS22950
ABZR87_RS22955: ABZR87_RS22955 - cytochrome c oxidase subunit 3, at 1,509,252 to 1,509,863
_RS22955
ABZR87_RS22960: ABZR87_RS22960 - heme-copper oxidase subunit III family protein, at 1,509,860 to 1,510,558
_RS22960
ABZR87_RS22965: ABZR87_RS22965 - cytochrome C oxidase subunit IV family protein, at 1,510,567 to 1,510,893
_RS22965
ABZR87_RS22970: ABZR87_RS22970 - cystathionine gamma-synthase family protein, at 1,511,368 to 1,512,603
_RS22970
Group
Condition
ABZR87
_RS22950
ABZR87
_RS22955
ABZR87
_RS22960
ABZR87
_RS22965
ABZR87
_RS22970
no_plant_soil
no_plant_soil sample 3; outgrowth in LB
-0.7
-0.4
-0.9
-0.2
-5.0
no_plant_soil
no_plant_soil sample 1; outgrowth in LB
-0.5
-0.8
-1.0
-0.5
-4.2
nitrogen source
nitrogen source nitrate 5mM
-0.0
+0.4
-0.4
+0.0
-6.3
carbon source
Heptanoic (C)
-0.1
-0.0
-0.2
-0.1
-5.7
no_plant_soil
no_plant_soil sample 2; outgrowth in LB
-0.5
-0.8
-1.0
-0.7
-2.9
carbon source
Protocatechuic Acid (C)
-0.0
+0.0
-0.2
-0.1
-5.6
carbon source
Lauric (C)
-0.0
-0.3
+0.1
-0.1
-5.5
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.0
-0.3
+0.0
-0.1
-5.4
no_plant_rhizosphere
no_plant_rhizosphere sample 2; outgrowth in LB
-0.0
-0.7
-0.4
-0.4
-4.2
carbon source
Heptanoic (C)
-0.2
-0.3
-0.0
-0.1
-5.0
carbon source
Hexanoic (C)
+0.0
-0.3
-0.4
-0.2
-4.7
carbon source
D-Galactose (C)
-0.1
-0.1
-0.1
+0.2
-5.5
carbon source
Protocatechuic Acid (C)
-0.1
-0.1
-0.4
+0.0
-5.1
carbon source
Glycerol (C)
+0.0
+0.1
-0.2
+0.1
-5.6
carbon source
Pimelic (C)
+0.1
-0.1
-0.1
+0.0
-5.4
carbon source
D-Galactose (C)
+0.0
-0.1
-0.0
+0.1
-5.5
carbon source
Valeric (C)
-0.2
-0.1
+0.2
-0.0
-5.3
carbon source
Sebacic (C)
-0.3
-0.3
+0.2
-0.2
-4.8
nitrogen source
nitrogen source Ammonium chloride 20mM
+0.0
-0.1
+0.8
+0.1
-6.2
nitrogen source
nitrogen source Ammonium chloride 20mM
-0.1
-0.1
+0.5
+0.0
-5.6
carbon source
propionate (C)
-0.0
+0.2
-0.1
-0.1
-5.2
carbon source
D-Glucose (C)
-0.0
+0.2
-0.1
+0.1
-5.3
nitrogen source
nitrogen source nitrate 20mM
-0.0
+0.5
+0.5
-0.6
-5.2
carbon source
Dodecandioic (C)
+0.2
+0.1
+0.1
-0.3
-4.8
carbon source
Octanoic (C)
-0.1
-0.1
+0.4
+0.3
-5.2
carbon source
4-Hydroxybenzoic Acid (C)
+0.1
-0.5
+0.2
+0.4
-4.8
nitrogen source
nitrogen source nitrate 20mM
-0.1
+0.4
+0.1
+0.0
-5.1
nitrogen source
nitrogen source nitrate 5mM
-0.1
+0.2
+0.7
+0.1
-5.2
carbon source
butyrate (C)
-0.0
+0.5
+0.4
+0.1
-5.0
carbon source
Sebacic (C)
+0.2
-0.2
+0.8
+0.1
-4.2
remove
ABZR87_RS22950
plot
remove
ABZR87_RS22955
plot
remove
ABZR87_RS22960
remove
ABZR87_RS22965
plot
remove
ABZR87_RS22970
plot