Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS22950 and ABZR87_RS22955 overlap by 4 nucleotidesABZR87_RS22955 and ABZR87_RS22960 overlap by 4 nucleotidesABZR87_RS22960 and ABZR87_RS22965 are separated by 8 nucleotidesABZR87_RS22965 and ABZR87_RS22970 are separated by 474 nucleotides ABZR87_RS22950: ABZR87_RS22950 - cytochrome c oxidase subunit I, at 1,507,465 to 1,509,255 _RS22950 ABZR87_RS22955: ABZR87_RS22955 - cytochrome c oxidase subunit 3, at 1,509,252 to 1,509,863 _RS22955 ABZR87_RS22960: ABZR87_RS22960 - heme-copper oxidase subunit III family protein, at 1,509,860 to 1,510,558 _RS22960 ABZR87_RS22965: ABZR87_RS22965 - cytochrome C oxidase subunit IV family protein, at 1,510,567 to 1,510,893 _RS22965 ABZR87_RS22970: ABZR87_RS22970 - cystathionine gamma-synthase family protein, at 1,511,368 to 1,512,603 _RS22970
Group Condition ABZR87_RS22950 ABZR87_RS22955 ABZR87_RS22960 ABZR87_RS22965 ABZR87_RS22970
no_plant_soil no_plant_soil sample 3; outgrowth in LB -0.7 -0.4 -0.9 -0.2 -5.0
no_plant_soil no_plant_soil sample 1; outgrowth in LB -0.5 -0.8 -1.0 -0.5 -4.2
nitrogen source nitrogen source nitrate 5mM -0.0 +0.4 -0.4 +0.0 -6.3
carbon source Heptanoic (C) -0.1 -0.0 -0.2 -0.1 -5.7
no_plant_soil no_plant_soil sample 2; outgrowth in LB -0.5 -0.8 -1.0 -0.7 -2.9
carbon source Protocatechuic Acid (C) -0.0 +0.0 -0.2 -0.1 -5.6
carbon source Lauric (C) -0.0 -0.3 +0.1 -0.1 -5.5
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.0 -0.3 +0.0 -0.1 -5.4
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -0.0 -0.7 -0.4 -0.4 -4.2
carbon source Heptanoic (C) -0.2 -0.3 -0.0 -0.1 -5.0
carbon source Hexanoic (C) +0.0 -0.3 -0.4 -0.2 -4.7
carbon source D-Galactose (C) -0.1 -0.1 -0.1 +0.2 -5.5
carbon source Protocatechuic Acid (C) -0.1 -0.1 -0.4 +0.0 -5.1
carbon source Glycerol (C) +0.0 +0.1 -0.2 +0.1 -5.6
carbon source Pimelic (C) +0.1 -0.1 -0.1 +0.0 -5.4
carbon source D-Galactose (C) +0.0 -0.1 -0.0 +0.1 -5.5
carbon source Valeric (C) -0.2 -0.1 +0.2 -0.0 -5.3
carbon source Sebacic (C) -0.3 -0.3 +0.2 -0.2 -4.8
nitrogen source nitrogen source Ammonium chloride 20mM +0.0 -0.1 +0.8 +0.1 -6.2
nitrogen source nitrogen source Ammonium chloride 20mM -0.1 -0.1 +0.5 +0.0 -5.6
carbon source propionate (C) -0.0 +0.2 -0.1 -0.1 -5.2
carbon source D-Glucose (C) -0.0 +0.2 -0.1 +0.1 -5.3
nitrogen source nitrogen source nitrate 20mM -0.0 +0.5 +0.5 -0.6 -5.2
carbon source Dodecandioic (C) +0.2 +0.1 +0.1 -0.3 -4.8
carbon source Octanoic (C) -0.1 -0.1 +0.4 +0.3 -5.2
carbon source 4-Hydroxybenzoic Acid (C) +0.1 -0.5 +0.2 +0.4 -4.8
nitrogen source nitrogen source nitrate 20mM -0.1 +0.4 +0.1 +0.0 -5.1
nitrogen source nitrogen source nitrate 5mM -0.1 +0.2 +0.7 +0.1 -5.2
carbon source butyrate (C) -0.0 +0.5 +0.4 +0.1 -5.0
carbon source Sebacic (C) +0.2 -0.2 +0.8 +0.1 -4.2
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