Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS22765 and ABZR87_RS22770 are separated by 10 nucleotidesABZR87_RS22770 and ABZR87_RS22775 are separated by 14 nucleotidesABZR87_RS22775 and ABZR87_RS22780 are separated by 15 nucleotidesABZR87_RS22780 and ABZR87_RS22785 are separated by 25 nucleotides ABZR87_RS22765: ABZR87_RS22765 - urea ABC transporter permease subunit UrtB, at 1,468,927 to 1,469,844 _RS22765 ABZR87_RS22770: ABZR87_RS22770 - urea ABC transporter permease subunit UrtC, at 1,469,855 to 1,470,991 _RS22770 ABZR87_RS22775: ABZR87_RS22775 - urea ABC transporter ATP-binding protein UrtD, at 1,471,006 to 1,471,767 _RS22775 ABZR87_RS22780: ABZR87_RS22780 - urea ABC transporter ATP-binding subunit UrtE, at 1,471,783 to 1,472,472 _RS22780 ABZR87_RS22785: ABZR87_RS22785 - aliphatic amidase, at 1,472,498 to 1,473,520 _RS22785
Group Condition ABZR87_RS22765 ABZR87_RS22770 ABZR87_RS22775 ABZR87_RS22780 ABZR87_RS22785
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 -0.5 -0.6 -0.4 +0.1
carbon source Octanoic (C) -0.4 -0.5 -0.0 -0.6 -0.0
carbon source Octanoic (C) -0.1 -0.2 -1.1 +0.3 +0.1
nitrogen source nitrogen source nitrite 0.5mM -0.6 +0.1 -0.2 -0.4 -0.0
carbon source Protocatechuic Acid (C) -0.0 -0.0 -0.6 -0.3 -0.1
carbon source Sebacic (C) -0.3 +0.1 -0.5 -0.2 -0.1
carbon source Dodecandioic (C) +0.1 -0.2 -0.3 -0.3 -0.1
rhizosphere rhizosphere sample 3; outgrowth in LB -0.4 -0.2 +0.2 -0.2 +0.1
carbon source Azelaic (C) +0.3 +0.1 +0.1 -0.5 +0.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 +0.2 +0.4 -0.2 +0.0
nitrogen source nitrogen source nitrate 5mM -0.2 +0.3 +0.4 -0.4 -0.0
no_plant_soil no_plant_soil sample 3; outgrowth in LB -0.1 +0.2 +0.2 -0.3 +0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 +0.5 -0.6 +0.2 +0.0
carbon source 4-Hydroxybenzoic Acid (C) +0.5 -0.3 +0.1 -0.1 +0.1
rhizosphere rhizosphere sample 9; outgrowth in LB +0.1 +0.3 -0.1 -0.2 +0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 -0.0 +0.8 -0.4 -0.0
carbon source Sebacic (C) -0.1 -0.2 +0.3 +0.2 +0.2
rhizosphere rhizosphere sample 4; outgrowth in LB -0.1 +0.3 +0.3 +0.1 +0.1
soil soil EcoFAB sample 2; outgrowth in LB +0.4 +0.1 +0.0 +0.4 -0.2
root root sample 4; outgrowth in LB -0.3 +0.0 +0.8 +0.0 +0.2
carbon source L-Glutamic (C) +0.1 +0.3 +0.2 +0.3 +0.2
root root sample 5; outgrowth in LB -0.4 +0.1 +0.4 +0.8 +0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.0 -0.1 +0.5 +0.6 +0.0
root root EcoFAB sample 1; outgrowth in LB +0.2 +0.2 +0.4 +0.1 +0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +0.0 +0.3 +0.3 +0.1
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB -0.1 +0.2 +0.7 +0.2 +0.1
soil soil sample 9; outgrowth in LB +0.1 +0.1 +0.5 +0.5 +0.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +0.4 +0.2 +0.3 +0.2
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB +0.4 +0.2 +0.7 +0.2 +0.2
soil soil EcoFAB sample 1; outgrowth in LB +0.4 +0.2 +1.0 -0.1 +0.3
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