Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS22710	ABZR87_RS22715	ABZR87_RS22720	ABZR87_RS22725	ABZR87_RS22730
rhizosphere	rhizosphere sample 2; outgrowth in LB	-1.8	-0.5	+0.1	+0.0	+0.2
rhizosphere	rhizosphere EcoFAB sample 1; outgrowth in LB	+0.0	-0.2	+0.1	-0.3	-1.4
root	root sample 5; outgrowth in LB	+0.0	-0.2	-0.5	-0.3	-0.8
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.5	-0.7	-0.4	-0.2	+0.2
phage	Ra1_0.1	-1.0	-0.4	+0.1	-0.0	-0.2
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.7	-0.4	-0.3	-0.0	-0.1
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.6	-0.3	-0.4	+0.2	-0.2
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.0	-0.2	-0.0	-0.2	-0.7
rhizosphere	rhizosphere EcoFAB sample 2; outgrowth in LB	-0.5	-0.1	+0.1	-0.5	-0.2
root	root sample 6; outgrowth in LB	-0.6	+0.4	+0.3	-0.5	-0.7
carbon source	butyrate (C)	-0.4	+0.1	-0.5	-0.1	-0.2
rhizosphere	rhizosphere sample 3; outgrowth in LB	-0.2	-0.3	-0.6	-0.1	+0.1
carbon source	Azelaic (C)	-0.6	-0.3	-0.2	-0.0	+0.2
carbon source	Protocatechuic Acid (C)	-0.2	+0.4	-0.3	-0.2	-0.3
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.7	+0.4	-0.0	+0.1	-0.3
carbon source	4-Hydroxybenzoic Acid (C)	-0.7	-0.4	+0.6	-0.1	+0.3
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.6	+0.2	-0.5	-0.1	-0.5
no_plant_soil	no_plant_soil sample 2; outgrowth in LB	+0.4	+0.2	-0.4	-0.1	-0.2
rhizosphere	rhizosphere sample 8; outgrowth in LB	+0.1	-0.0	-0.4	+0.5	-0.2
rhizosphere	rhizosphere sample 9; outgrowth in LB	+1.0	-0.8	-0.3	+0.3	-0.2
no_plant_rhizosphere	no_plant_rhizosphere sample 1; outgrowth in LB	+0.5	+0.2	-0.4	+0.1	-0.1
soil	soil EcoFAB sample 1; outgrowth in LB	+0.4	-0.1	+0.3	-0.4	+0.3
carbon source	Valeric (C)	+0.6	+0.2	-0.3	+0.2	-0.0
carbon source	L-Glutamic (C)	+0.5	+0.4	-0.1	-0.2	+0.3
carbon source	Octanoic (C)	+1.0	+0.3	-0.5	-0.0	+0.3
nitrogen source	nitrogen source nitrate 20mM	+0.7	+0.5	-0.1	-0.1	+0.1
carbon source	Sebacic (C)	+0.7	+0.2	+0.2	+0.3	-0.1
root	root EcoFAB sample 1; outgrowth in LB	+1.7	-0.0	-0.1	-0.2	-0.0
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.2	+0.7	+0.3	+0.4	-0.1
nitrogen source	nitrogen source nitrite 0.5mM	+0.7	+0.5	+0.0	+0.1	+0.2