Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 129 experiments or choose conditions or try the comparative fitness browser

500 ntABZR87_RS22695 and ABZR87_RS22700 are separated by 361 nucleotidesABZR87_RS22700 and ABZR87_RS22705 are separated by 157 nucleotidesABZR87_RS22705 and ABZR87_RS22710 are separated by 16 nucleotidesABZR87_RS22710 and ABZR87_RS22715 are separated by 117 nucleotides ABZR87_RS22695: ABZR87_RS22695 - MATE family efflux transporter, at 1,449,907 to 1,451,262 _RS22695 ABZR87_RS22700: ABZR87_RS22700 - APC family permease, at 1,451,624 to 1,453,270 _RS22700 ABZR87_RS22705: ABZR87_RS22705 - DUF4349 domain-containing protein, at 1,453,428 to 1,454,273 _RS22705 ABZR87_RS22710: ABZR87_RS22710 - VOC family protein, at 1,454,290 to 1,455,300 _RS22710 ABZR87_RS22715: ABZR87_RS22715 - ABC transporter substrate-binding protein, at 1,455,418 to 1,456,398 _RS22715
Group Condition ABZR87_RS22695 ABZR87_RS22700 ABZR87_RS22705 ABZR87_RS22710 ABZR87_RS22715
rhizosphere rhizosphere sample 2; outgrowth in LB -0.0 -0.2 +0.2 -1.8 -0.5
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 -0.3 -0.3 -0.7 -0.4
phage Ra1_0.1 -0.0 -0.4 +0.2 -1.0 -0.4
soil soil EcoFAB sample 1; outgrowth in LB -0.7 -0.5 -0.4 +0.4 -0.1
root root sample 6; outgrowth in LB -0.1 -0.5 +0.2 -0.6 +0.4
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 -0.2 +0.7 -0.5 -0.7
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 -0.2 -0.2 -0.7 +0.4
root root EcoFAB sample 2; outgrowth in LB -0.1 -0.5 +0.2 +0.3 -0.4
micoeukaryotes C.elegans, mixed culture-2 -0.2 +1.1 -0.2 -0.2 -0.1
carbon source 4-Hydroxybenzoic Acid (C) -0.5 +1.5 +0.4 -0.7 -0.4
carbon source Azelaic (C) -0.5 +2.5 -0.6 -0.6 -0.3
rhizosphere rhizosphere sample 9; outgrowth in LB +0.2 -0.4 +0.5 +1.0 -0.8
carbon source butyrate (C) -0.0 +0.8 -0.4 +0.3 +0.0
carbon source Protocatechuic Acid (C) -0.2 +0.8 -0.1 +0.2 +0.3
carbon source propionate (C) -0.2 +1.3 -0.0 -0.0 +0.0
carbon source L-Glutamic (C) -0.2 +0.1 +0.3 +0.5 +0.4
carbon source Valeric (C) -0.2 +0.4 +0.1 +0.6 +0.2
carbon source Sebacic (C) -0.2 +1.7 -0.3 -0.0 +0.0
root root EcoFAB sample 1; outgrowth in LB -0.2 -0.0 -0.2 +1.7 -0.0
nitrogen source nitrogen source nitrite 0.5mM +0.2 +0.1 +0.7 +0.6 -0.1
carbon source propionate (C) -0.2 +1.1 -0.1 +0.3 +0.2
carbon source Protocatechuic Acid (C) +0.3 +1.0 +0.3 -0.2 +0.4
carbon source Dodecandioic (C) -0.2 +2.2 -0.2 +0.2 -0.1
carbon source Lauric (C) -0.3 +2.0 -0.0 +0.3 +0.1
carbon source Sebacic (C) -0.6 +2.8 -0.8 +0.7 +0.2
carbon source Octanoic (C) -0.9 +3.1 +0.4 -0.1 +0.0
carbon source Dodecandioic (C) -0.4 +2.5 +0.0 +0.2 +0.2
carbon source Heptanoic (C) -0.3 +2.8 +0.0 +0.2 -0.0
carbon source Heptanoic (C) -0.3 +2.8 -0.3 +0.3 +0.2
carbon source Octanoic (C) -0.7 +3.3 -0.3 +1.0 +0.3
remove
ABZR87_RS22695
plot		 remove
ABZR87_RS22700
plot		 remove
ABZR87_RS22705		 remove
ABZR87_RS22710
plot		 remove
ABZR87_RS22715
plot