Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS22320	ABZR87_RS22325	ABZR87_RS22330	ABZR87_RS22335	ABZR87_RS22340
carbon source	Sebacic (C)	-0.3	-1.9	-2.8	+0.3	-3.8
rhizosphere	rhizosphere EcoFAB sample 1; outgrowth in LB	-0.3	-0.4	-0.5	+0.5	-4.5
carbon source	Azelaic (C)	+0.1	-0.4	-0.4	+0.4	-4.3
rhizosphere	rhizosphere sample 2; outgrowth in LB	-0.1	-0.9	-1.6	+1.5	-2.9
carbon source	4-Hydroxybenzoic Acid (C)	-0.4	-1.4	-3.5	+0.9	+0.3
root	root EcoFAB sample 1; outgrowth in LB	-0.4	-2.0	-0.6	+0.6	-0.1
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.4	-0.8	+0.0	-0.3	-1.3
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.4	-0.2	+0.6	-0.2	-2.3
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.2	-1.1	+0.4	+0.0	-1.3
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.1	-2.5	+0.2	+1.3	-0.5
rhizosphere	rhizosphere EcoFAB sample 2; outgrowth in LB	-0.3	-0.9	-0.8	+0.7	-0.3
root	root sample 4; outgrowth in LB	-0.2	-2.2	-0.1	+1.7	-0.8
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.2	-0.2	+1.0	-0.2	-1.7
rhizosphere	rhizosphere sample 3; outgrowth in LB	-0.0	-0.3	-0.3	+1.2	-1.5
root	root sample 6; outgrowth in LB	-0.2	-2.8	+0.7	+2.2	-0.5
no_plant_rhizosphere	no_plant_rhizosphere sample 3; outgrowth in LB	-0.3	-1.3	-0.1	+0.8	+0.4
rhizosphere	rhizosphere sample 9; outgrowth in LB	-0.0	-1.2	-0.3	+1.5	-0.2
rhizosphere	rhizosphere sample 7; outgrowth in LB	-0.3	-0.7	+0.1	+1.7	-0.6
no_plant_soil	no_plant_soil sample 2; outgrowth in LB	-0.0	-1.3	+2.0	+0.2	-0.4
rhizosphere	rhizosphere sample 6; outgrowth in LB	-0.2	-1.9	-0.0	+1.9	+0.7
micoeukaryotes	Dictyostellum sp.mixed culture-2	+0.0	-1.0	+1.2	+0.7	-0.3
carbon source	Octanoic (C)	+0.3	-1.2	+0.1	+0.3	+1.3
carbon source	Heptanoic (C)	+0.3	+0.4	+1.3	-0.3	-0.9
nitrogen source	nitrogen source nitrate 5mM	-0.0	+1.0	-1.1	+0.2	+0.9
no_plant_rhizosphere	no_plant_rhizosphere sample 1; outgrowth in LB	+0.2	+0.2	+1.5	+0.3	-0.8
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.1	-0.1	+2.4	+0.1	-0.9
micoeukaryotes	C.elegans, mixed culture-2	-0.0	-0.5	+1.1	+0.4	+1.2
phage	Ra1_0.1	+0.2	-0.1	+1.9	-0.3	+0.7
phage	Ra3_1	+0.4	+0.5	+1.4	-0.3	+0.6
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.1	-0.4	+3.0	-0.0	+0.1