Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS22270 and ABZR87_RS22275 are separated by 45 nucleotidesABZR87_RS22275 and ABZR87_RS22280 are separated by 54 nucleotidesABZR87_RS22280 and ABZR87_RS22285 are separated by 27 nucleotidesABZR87_RS22285 and ABZR87_RS22290 are separated by 212 nucleotides ABZR87_RS22270: ABZR87_RS22270 - flagellar basal-body rod protein FlgF, at 1,357,321 to 1,358,058 _RS22270 ABZR87_RS22275: ABZR87_RS22275 - flagellar hook protein FlgE, at 1,358,104 to 1,359,312 _RS22275 ABZR87_RS22280: ABZR87_RS22280 - flagellar hook assembly protein FlgD, at 1,359,367 to 1,360,023 _RS22280 ABZR87_RS22285: ABZR87_RS22285 - flagellar basal body rod protein FlgC, at 1,360,051 to 1,360,458 _RS22285 ABZR87_RS22290: ABZR87_RS22290 - flagellar basal body rod protein FlgB, at 1,360,671 to 1,361,126 _RS22290
Group Condition ABZR87_RS22270 ABZR87_RS22275 ABZR87_RS22280 ABZR87_RS22285 ABZR87_RS22290
phage Ra3_1 -2.0 -2.1 -1.7 -2.8 -2.3
phage Ra1_0.1 -2.1 -1.9 -2.0 -1.6 -2.6
soil soil sample 7; outgrowth in LB +2.0 +1.9 +1.5 +2.4 +1.4
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB +2.3 +1.9 +1.8 +2.0 +1.7
root root EcoFAB sample 1; outgrowth in LB +2.1 +2.0 +1.9 +2.0 +1.8
no_plant_soil no_plant_soil sample 3; outgrowth in LB +2.3 +2.2 +1.7 +2.2 +1.9
soil soil sample 1; outgrowth in LB +2.4 +2.4 +1.8 +2.1 +1.9
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +2.4 +2.1 +2.0 +2.2 +2.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +2.3 +2.2 +1.6 +2.6 +2.2
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB +2.5 +2.4 +2.0 +2.6 +2.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +2.7 +2.3 +1.6 +3.5 +2.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +3.1 +2.6 +2.1 +2.0 +2.5
root root EcoFAB sample 2; outgrowth in LB +2.6 +2.8 +2.0 +2.8 +2.5
root root sample 5; outgrowth in LB +2.5 +2.6 +2.1 +2.8 +2.6
soil soil sample 9; outgrowth in LB +2.6 +2.7 +2.2 +2.9 +2.4
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +2.7 +2.8 +1.8 +3.1 +2.9
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +3.0 +2.7 +2.5 +3.0 +2.6
rhizosphere rhizosphere sample 2; outgrowth in LB +3.0 +3.0 +2.7 +3.2 +2.8
rhizosphere rhizosphere sample 4; outgrowth in LB +3.1 +3.0 +2.4 +3.5 +2.6
rhizosphere rhizosphere sample 5; outgrowth in LB +3.1 +3.1 +2.4 +3.5 +2.9
rhizosphere rhizosphere sample 3; outgrowth in LB +2.9 +3.2 +2.8 +3.1 +3.1
root root sample 6; outgrowth in LB +3.4 +3.4 +2.8 +3.3 +2.9
rhizosphere rhizosphere sample 8; outgrowth in LB +3.5 +3.5 +2.8 +3.3 +3.3
root root sample 4; outgrowth in LB +3.5 +3.4 +3.0 +3.4 +3.3
rhizosphere rhizosphere sample 6; outgrowth in LB +3.5 +3.4 +2.9 +3.6 +3.3
soil soil sample 4; outgrowth in LB +3.7 +3.6 +2.9 +3.4 +3.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +3.2 +2.3 +2.3 +5.3 +4.0
rhizosphere rhizosphere sample 9; outgrowth in LB +3.8 +3.8 +3.2 +3.7 +3.6
rhizosphere rhizosphere sample 7; outgrowth in LB +3.8 +3.7 +3.1 +4.0 +3.6
rhizosphere rhizosphere sample 1; outgrowth in LB +4.2 +4.0 +3.4 +4.0 +3.8
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