Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS22245 and ABZR87_RS22250 are separated by 115 nucleotidesABZR87_RS22250 and ABZR87_RS22255 are separated by 16 nucleotidesABZR87_RS22255 and ABZR87_RS22260 are separated by 10 nucleotidesABZR87_RS22260 and ABZR87_RS22265 are separated by 33 nucleotides ABZR87_RS22245: ABZR87_RS22245 - flagellar hook-associated protein FlgK, at 1,351,449 to 1,353,383 _RS22245 ABZR87_RS22250: ABZR87_RS22250 - flagellar assembly peptidoglycan hydrolase FlgJ, at 1,353,499 to 1,354,584 _RS22250 ABZR87_RS22255: ABZR87_RS22255 - flagellar basal body P-ring protein FlgI, at 1,354,601 to 1,355,719 _RS22255 ABZR87_RS22260: ABZR87_RS22260 - flagellar basal body L-ring protein FlgH, at 1,355,730 to 1,356,464 _RS22260 ABZR87_RS22265: ABZR87_RS22265 - flagellar basal-body rod protein FlgG, at 1,356,498 to 1,357,280 _RS22265
Group Condition ABZR87_RS22245 ABZR87_RS22250 ABZR87_RS22255 ABZR87_RS22260 ABZR87_RS22265
phage Ra3_1 -2.5 -1.4 -3.6 -3.9 -2.2
phage Ra1_0.1 -1.8 -1.9 -3.4 -3.4 -2.6
soil soil sample 8; outgrowth in LB +1.0 +1.7 +1.7 +1.7 +2.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +2.3 +0.7 +1.5 +1.3 +2.3
soil soil sample 7; outgrowth in LB +1.3 +1.0 +2.2 +1.9 +2.0
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +2.1 +1.6 +2.5 +0.5 +1.8
soil soil sample 1; outgrowth in LB +1.3 +1.8 +2.0 +2.3 +2.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +2.9 +1.2 +2.5 +1.4 +1.7
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +2.8 +1.4 +2.2 +1.9 +1.6
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB +1.4 +1.5 +2.1 +2.5 +2.7
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +3.1 +1.3 +2.6 +1.7 +2.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +3.3 +1.4 +2.9 +1.3 +2.0
root root EcoFAB sample 2; outgrowth in LB +1.9 +1.8 +2.6 +2.5 +2.5
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +3.4 +1.1 +2.4 +2.6 +1.8
root root sample 5; outgrowth in LB +1.6 +2.5 +2.3 +2.6 +2.5
soil soil sample 9; outgrowth in LB +1.8 +1.9 +2.7 +2.6 +2.5
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +4.3 +1.4 +2.6 +1.2 +2.4
rhizosphere rhizosphere sample 2; outgrowth in LB +2.0 +3.0 +2.8 +2.2 +3.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +4.1 +1.8 +2.1 +2.7 +2.8
rhizosphere rhizosphere sample 3; outgrowth in LB +2.1 +2.5 +3.0 +3.0 +3.1
rhizosphere rhizosphere sample 4; outgrowth in LB +2.0 +2.9 +2.9 +2.9 +3.2
rhizosphere rhizosphere sample 5; outgrowth in LB +2.1 +2.9 +3.0 +3.0 +3.2
root root sample 4; outgrowth in LB +2.7 +3.1 +3.2 +3.0 +3.3
soil soil sample 4; outgrowth in LB +3.0 +2.2 +3.4 +3.4 +3.4
root root sample 6; outgrowth in LB +2.5 +3.2 +3.1 +3.4 +3.2
rhizosphere rhizosphere sample 8; outgrowth in LB +2.5 +3.2 +3.3 +3.4 +3.5
rhizosphere rhizosphere sample 6; outgrowth in LB +2.5 +3.2 +3.4 +3.5 +3.4
rhizosphere rhizosphere sample 9; outgrowth in LB +2.9 +3.7 +4.0 +3.8 +3.8
rhizosphere rhizosphere sample 1; outgrowth in LB +2.8 +3.6 +3.8 +4.1 +4.0
rhizosphere rhizosphere sample 7; outgrowth in LB +3.4 +3.5 +4.1 +3.6 +4.0
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