Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS22200 and ABZR87_RS22205 are separated by 68 nucleotidesABZR87_RS22205 and ABZR87_RS22210 overlap by 4 nucleotidesABZR87_RS22210 and ABZR87_RS22215 are separated by 19 nucleotidesABZR87_RS22215 and ABZR87_RS22220 are separated by 33 nucleotides ABZR87_RS22200: ABZR87_RS22200 - flagellar motor switch protein FliN, at 1,345,322 to 1,345,789 _RS22200 ABZR87_RS22205: ABZR87_RS22205 - flagellar biosynthetic protein FliO, at 1,345,858 to 1,346,259 _RS22205 ABZR87_RS22210: ABZR87_RS22210 - flagellar type III secretion system pore protein FliP, at 1,346,256 to 1,347,005 _RS22210 ABZR87_RS22215: ABZR87_RS22215 - flagellar biosynthesis protein FliQ, at 1,347,025 to 1,347,294 _RS22215 ABZR87_RS22220: ABZR87_RS22220 - flagellar biosynthetic protein FliR, at 1,347,328 to 1,348,122 _RS22220
Group Condition ABZR87_RS22200 ABZR87_RS22205 ABZR87_RS22210 ABZR87_RS22215 ABZR87_RS22220
phage Ra1_0.1 N.D. -1.8 -3.7 N.D. -2.3
phage Ra3_1 N.D. -2.9 -2.2 N.D. -2.4
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. +1.6 +2.6 N.D. +1.8
soil soil sample 8; outgrowth in LB N.D. +1.8 +2.1 N.D. +2.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. +3.4 +1.8 N.D. +1.0
no_plant_soil no_plant_soil sample 3; outgrowth in LB N.D. +1.9 +2.1 N.D. +2.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. +2.5 +2.1 N.D. +1.8
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. +1.8 +1.9 N.D. +2.7
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. +2.1 +2.3 N.D. +2.0
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB N.D. +2.3 +2.2 N.D. +2.0
soil soil sample 1; outgrowth in LB N.D. +2.3 +2.4 N.D. +2.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. +2.4 +2.3 N.D. +2.3
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB N.D. +2.5 +2.5 N.D. +2.4
root root sample 5; outgrowth in LB N.D. +2.7 +2.4 N.D. +2.4
soil soil sample 9; outgrowth in LB N.D. +2.4 +2.6 N.D. +2.6
root root EcoFAB sample 2; outgrowth in LB N.D. +2.7 +2.6 N.D. +2.6
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. +2.8 +2.7 N.D. +2.4
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. +2.0 +2.9 N.D. +3.3
rhizosphere rhizosphere sample 2; outgrowth in LB N.D. +2.7 +3.1 N.D. +2.8
rhizosphere rhizosphere sample 3; outgrowth in LB N.D. +3.0 +3.1 N.D. +3.1
rhizosphere rhizosphere sample 4; outgrowth in LB N.D. +3.4 +3.3 N.D. +3.0
root root sample 4; outgrowth in LB N.D. +3.1 +3.4 N.D. +3.2
rhizosphere rhizosphere sample 5; outgrowth in LB N.D. +3.4 +3.2 N.D. +3.2
root root sample 6; outgrowth in LB N.D. +3.5 +3.2 N.D. +3.2
rhizosphere rhizosphere sample 8; outgrowth in LB N.D. +3.3 +3.5 N.D. +3.4
soil soil sample 4; outgrowth in LB N.D. +3.4 +3.6 N.D. +3.5
rhizosphere rhizosphere sample 6; outgrowth in LB N.D. +3.6 +3.5 N.D. +3.5
rhizosphere rhizosphere sample 7; outgrowth in LB N.D. +3.7 +3.9 N.D. +3.9
rhizosphere rhizosphere sample 9; outgrowth in LB N.D. +4.2 +4.0 N.D. +3.8
rhizosphere rhizosphere sample 1; outgrowth in LB N.D. +4.0 +4.1 N.D. +3.9
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