Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS22155 and ABZR87_RS22160 overlap by 7 nucleotidesABZR87_RS22160 and ABZR87_RS22165 are separated by 58 nucleotidesABZR87_RS22165 and ABZR87_RS22170 are separated by 60 nucleotidesABZR87_RS22170 and ABZR87_RS22175 are separated by 198 nucleotides ABZR87_RS22155: ABZR87_RS22155 - glycosyltransferase, at 1,335,468 to 1,336,550 _RS22155 ABZR87_RS22160: ABZR87_RS22160 - flagellar protein FliT, at 1,336,544 to 1,336,900 _RS22160 ABZR87_RS22165: ABZR87_RS22165 - flagellar export chaperone FliS, at 1,336,959 to 1,337,396 _RS22165 ABZR87_RS22170: ABZR87_RS22170 - flagellar filament capping protein FliD, at 1,337,457 to 1,339,505 _RS22170 ABZR87_RS22175: ABZR87_RS22175 - flagellin, at 1,339,704 to 1,340,525 _RS22175
Group Condition ABZR87_RS22155 ABZR87_RS22160 ABZR87_RS22165 ABZR87_RS22170 ABZR87_RS22175
micoeukaryotes C.elegans, mixed culture-2 +0.0 -0.3 -1.6 -0.3 -0.9
phage Ra1_0.1 +0.1 -0.0 -1.6 -0.2 -1.1
carbon source Sebacic (C) +0.0 +1.0 -1.1 +0.8 -0.1
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 -0.2 +0.3 -0.1 +2.0
rhizosphere rhizosphere sample 2; outgrowth in LB +0.2 -0.4 -0.6 +0.5 +2.2
root root sample 5; outgrowth in LB -0.1 -0.2 -0.2 +0.7 +1.9
root root sample 6; outgrowth in LB +0.1 +0.5 -1.1 +0.3 +2.8
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 +0.2 +0.2 +0.3 +2.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 -0.4 +0.7 +0.4 +2.0
root root EcoFAB sample 1; outgrowth in LB +0.1 -0.0 +1.0 +0.3 +1.4
rhizosphere rhizosphere sample 4; outgrowth in LB +0.3 +0.5 -1.2 +0.8 +2.4
soil soil sample 7; outgrowth in LB +0.0 +0.6 +0.6 +0.3 +1.7
rhizosphere rhizosphere sample 5; outgrowth in LB +0.0 +0.1 +0.4 +0.5 +2.3
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB +0.0 +0.2 +1.0 +0.3 +1.9
rhizosphere rhizosphere sample 6; outgrowth in LB +0.1 -0.1 +0.2 +0.5 +2.8
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 +0.6 +0.2 +0.4 +2.6
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 +0.8 -0.0 +0.4 +2.5
rhizosphere rhizosphere sample 8; outgrowth in LB +0.0 +0.2 -0.3 +0.8 +2.8
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB +0.1 +0.5 +1.4 +0.3 +1.4
rhizosphere rhizosphere sample 1; outgrowth in LB -0.2 +0.2 +0.4 +0.3 +3.0
root root EcoFAB sample 2; outgrowth in LB +0.3 +0.6 +0.5 +0.3 +2.2
root root sample 4; outgrowth in LB +0.4 +0.8 -0.8 +0.6 +3.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 +0.4 -0.4 +0.2 +3.8
soil soil sample 9; outgrowth in LB +0.0 +0.7 +0.8 +0.6 +2.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.0 +0.2 +1.8 +0.3 +2.2
soil soil sample 4; outgrowth in LB +0.0 +0.4 +0.8 +0.4 +3.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.0 -0.2 +1.9 +0.4 +3.1
rhizosphere rhizosphere sample 7; outgrowth in LB -0.1 +0.4 +1.1 +0.4 +3.5
rhizosphere rhizosphere sample 3; outgrowth in LB +0.1 +1.1 +1.2 +0.8 +2.4
rhizosphere rhizosphere sample 9; outgrowth in LB -0.1 +1.0 +1.1 +0.7 +3.2
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