Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS21990	ABZR87_RS21995	ABZR87_RS22000	ABZR87_RS22005	ABZR87_RS22010
soil	soil EcoFAB sample 1; outgrowth in LB	-0.2	-0.4	-2.1	N.D.	-0.6
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.6	-0.5	-1.6	N.D.	+0.4
carbon source	Octanoic (C)	+0.3	+0.0	-1.8	N.D.	-0.5
no_plant_soil	no_plant_soil sample 3; outgrowth in LB	+0.1	-0.3	-0.8	N.D.	-0.8
rhizosphere	rhizosphere sample 6; outgrowth in LB	-0.2	+0.1	-1.3	N.D.	-0.1
no_plant_rhizosphere	no_plant_rhizosphere sample 1; outgrowth in LB	+0.3	-0.1	-1.6	N.D.	+0.1
carbon source	Octanoic (C)	+0.7	-0.3	-0.5	N.D.	-1.1
rhizosphere	rhizosphere sample 1; outgrowth in LB	-1.4	-0.3	+0.1	N.D.	+0.6
rhizosphere	rhizosphere sample 3; outgrowth in LB	+0.1	-0.5	-1.0	N.D.	+0.4
carbon source	Heptanoic (C)	+0.3	+0.1	-1.1	N.D.	-0.2
carbon source	Valeric (C)	+0.6	-0.2	-0.3	N.D.	-1.0
rhizosphere	rhizosphere EcoFAB sample 2; outgrowth in LB	+0.3	+0.1	-0.6	N.D.	-0.8
carbon source	Dodecandioic (C)	+0.5	-0.1	-1.2	N.D.	+0.0
nitrogen source	nitrogen source nitrite 0.5mM	+0.3	-0.0	-1.6	N.D.	+0.7
carbon source	succinate (C)	+0.4	+0.1	-0.9	N.D.	-0.2
carbon source	Protocatechuic Acid (C)	+0.6	+0.1	-0.6	N.D.	-0.7
carbon source	Protocatechuic Acid (C)	-0.6	-0.5	+1.0	N.D.	+0.1
nitrogen source	nitrogen source nitrite 5mM	+0.5	+0.0	-0.9	N.D.	+0.3
root	root sample 5; outgrowth in LB	+0.4	+0.0	+0.8	N.D.	-1.1
carbon source	4-Hydroxybenzoic Acid (C)	-0.4	-0.4	+0.9	N.D.	+0.2
root	root EcoFAB sample 1; outgrowth in LB	+1.1	-0.0	-0.4	N.D.	-0.3
rhizosphere	rhizosphere EcoFAB sample 1; outgrowth in LB	+0.3	-0.3	+0.5	N.D.	+0.4
phage	Ra1_0.1	-0.4	+0.3	+1.1	N.D.	+0.1
rhizosphere	rhizosphere sample 2; outgrowth in LB	+1.8	+0.1	+0.1	N.D.	-0.8
carbon source	3-Hydroxypropionate (C)	-0.2	+0.1	+1.2	N.D.	+0.1
root	root sample 6; outgrowth in LB	+1.1	+0.2	-0.5	N.D.	+0.5
carbon source	Protocatechuic Acid (C)	+0.1	+0.0	+0.6	N.D.	+0.8
nitrogen source	nitrogen source nitrate 5mM	+0.0	+0.1	+0.9	N.D.	+0.6
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.3	+0.5	+0.9	N.D.	+0.2
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.4	-0.0	+0.7	N.D.	+0.9