Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS21380 and ABZR87_RS21385 are separated by 99 nucleotidesABZR87_RS21385 and ABZR87_RS21390 are separated by 144 nucleotidesABZR87_RS21390 and ABZR87_RS21395 are separated by 33 nucleotidesABZR87_RS21395 and ABZR87_RS21400 are separated by 134 nucleotides ABZR87_RS21380: ABZR87_RS21380 - hypothetical protein, at 1,178,535 to 1,178,705 _RS21380 ABZR87_RS21385: ABZR87_RS21385 - manganese catalase family protein, at 1,178,805 to 1,179,674 _RS21385 ABZR87_RS21390: ABZR87_RS21390 - Nramp family divalent metal transporter, at 1,179,819 to 1,181,114 _RS21390 ABZR87_RS21395: ABZR87_RS21395 - NmrA family NAD(P)-binding protein, at 1,181,148 to 1,182,020 _RS21395 ABZR87_RS21400: ABZR87_RS21400 - DUF2252 family protein, at 1,182,155 to 1,183,357 _RS21400
Group Condition ABZR87_RS21380 ABZR87_RS21385 ABZR87_RS21390 ABZR87_RS21395 ABZR87_RS21400
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -0.4 +0.2 +0.0 -0.4 -0.7
carbon source 4-Hydroxybenzoic Acid (C) -0.1 -0.1 -0.0 +0.1 -1.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.6 -0.1 -0.1 +0.1 -0.3
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB +0.1 -0.1 -0.0 -0.3 -0.6
soil soil sample 9; outgrowth in LB -0.7 +0.2 -0.1 -0.1 -0.1
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.9 +0.8 +0.4 +0.1 -1.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.6 -0.2 +0.2 -0.3 +0.1
nitrogen source nitrogen source nitrate 5mM -0.9 +0.2 +0.1 +0.1 -0.2
soil soil EcoFAB sample 1; outgrowth in LB -0.1 -0.2 +0.0 +0.2 -0.5
nitrogen source nitrogen source nitrite 0.5mM -0.5 +0.3 -0.0 -0.4 +0.1
carbon source L-Glutamic (C) -0.5 +0.1 -0.1 +0.2 -0.2
no_plant_soil no_plant_soil sample 1; outgrowth in LB -0.6 -0.2 -0.1 -0.1 +0.5
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.0 +0.6 +0.0 -0.0 +0.1
nitrogen source nitrogen source nitrate 20mM -0.4 +0.4 -0.1 +0.2 -0.4
rhizosphere rhizosphere sample 9; outgrowth in LB +0.1 +0.4 -0.1 +0.1 -0.6
nitrogen source nitrogen source nitrate 20mM -0.4 +0.4 -0.3 +0.2 +0.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.0 -0.0 +0.1 +0.5 +0.4
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB -0.5 +0.5 +0.2 -0.2 +0.1
nitrogen source nitrogen source Ammonium chloride 20mM -0.4 +0.5 -0.1 +0.0 +0.1
carbon source Protocatechuic Acid (C) +0.4 +0.1 -0.2 -0.2 +0.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.7 +0.1 +0.3 -0.8 -0.2
carbon source Octanoic (C) +0.4 +0.0 +0.1 -0.8 +0.6
root root sample 6; outgrowth in LB -0.7 +0.2 -0.1 +0.3 +0.6
root root EcoFAB sample 1; outgrowth in LB -0.5 +0.2 +0.1 +0.3 +0.4
carbon source Octanoic (C) +0.1 +0.3 +0.0 -0.2 +0.5
rhizosphere rhizosphere sample 5; outgrowth in LB -0.2 +0.0 +0.3 +0.2 +0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 -0.2 +0.4 +0.2 -0.1
nitrogen source nitrogen source nitrite 0.5mM -0.1 +0.2 +0.1 +0.4 +0.4
carbon source Sebacic (C) +0.4 +0.0 -0.0 -0.0 +0.6
carbon source Azelaic (C) +0.4 +0.1 +0.1 +0.4 +0.3
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ABZR87_RS21385
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