Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS21130	ABZR87_RS21135	ABZR87_RS21140	ABZR87_RS21145	ABZR87_RS21150
root	root sample 5; outgrowth in LB	+0.2	-0.3	-0.6	+0.1	-2.5
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.2	+1.7	-2.0	-1.6	-0.5
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.0	-0.6	-0.8	-0.8	+0.3
carbon source	Azelaic (C)	-0.1	-0.6	+0.1	+0.5	-1.2
carbon source	Pimelic (C)	+0.1	-0.3	-0.5	+0.1	-0.6
carbon source	Hexanoic (C)	+0.1	-0.1	-0.9	+0.4	-0.5
carbon source	butyrate (C)	+0.2	-0.2	-0.6	+0.3	-0.5
micoeukaryotes	Dictyostellum sp.mixed culture-1	-0.1	+0.5	-0.6	-0.5	-0.0
carbon source	D-Glucose (C)	+0.0	-0.2	-0.6	+0.4	-0.5
carbon source	Sebacic (C)	+0.3	-0.2	-0.6	+0.5	-0.6
carbon source	succinate (C)	+0.1	-0.3	-0.2	+0.5	-0.7
nitrogen source	nitrogen source nitrite 1mM	+0.2	+0.3	-0.5	+0.2	-0.6
nitrogen source	nitrogen source nitrite 0.5mM	+0.3	-0.3	+0.3	-0.3	-0.4
carbon source	Dodecandioic (C)	+0.1	-0.4	-0.1	+0.6	-0.5
rhizosphere	rhizosphere sample 1; outgrowth in LB	+0.3	-0.1	-0.0	+0.5	-0.9
carbon source	succinate (C)	+0.3	-0.2	-0.2	+0.5	-0.5
phage	Ra3_0.01	+0.3	+0.5	+0.1	-0.3	-0.5
soil	soil EcoFAB sample 2; outgrowth in LB	+0.0	-0.2	+0.8	-0.1	+0.6
root	root EcoFAB sample 1; outgrowth in LB	+0.1	+0.5	+0.1	-0.4	+1.0
no_plant_rhizosphere	no_plant_rhizosphere sample 3; outgrowth in LB	+0.1	-0.2	+0.1	+0.3	+0.9
soil	soil EcoFAB sample 1; outgrowth in LB	+0.5	+0.6	-0.5	-0.4	+1.2
rhizosphere	rhizosphere sample 2; outgrowth in LB	-0.0	+0.4	-0.4	+0.2	+1.2
root	root sample 4; outgrowth in LB	+0.3	-0.0	+0.3	-0.2	+1.1
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.2	+1.2	+0.7	-0.1	-0.4
rhizosphere	rhizosphere sample 9; outgrowth in LB	+0.1	-0.1	-0.3	-0.0	+2.1
carbon source	Sebacic (C)	+0.5	+0.3	+0.3	-0.4	+1.1
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.0	+0.6	+0.8	+0.5	+0.1
rhizosphere	rhizosphere sample 3; outgrowth in LB	+0.2	-0.5	+1.1	+0.4	+1.4
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.4	+0.4	+0.2	+1.0	+0.8
rhizosphere	rhizosphere EcoFAB sample 1; outgrowth in LB	+0.3	-0.2	+1.1	+0.6	+1.1