Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS20695 and ABZR87_RS20700 are separated by 29 nucleotidesABZR87_RS20700 and ABZR87_RS20705 are separated by 150 nucleotidesABZR87_RS20705 and ABZR87_RS20710 are separated by 79 nucleotidesABZR87_RS20710 and ABZR87_RS20715 are separated by 403 nucleotides ABZR87_RS20695: ABZR87_RS20695 - hypothetical protein, at 1,029,514 to 1,030,098 _RS20695 ABZR87_RS20700: ABZR87_RS20700 - PIG-L family deacetylase, at 1,030,128 to 1,035,536 _RS20700 ABZR87_RS20705: ABZR87_RS20705 - GNAT family N-acetyltransferase, at 1,035,687 to 1,036,154 _RS20705 ABZR87_RS20710: ABZR87_RS20710 - hypothetical protein, at 1,036,234 to 1,037,328 _RS20710 ABZR87_RS20715: ABZR87_RS20715 - DUF2798 domain-containing protein, at 1,037,732 to 1,037,983 _RS20715
Group Condition ABZR87_RS20695 ABZR87_RS20700 ABZR87_RS20705 ABZR87_RS20710 ABZR87_RS20715
root root EcoFAB sample 2; outgrowth in LB -0.4 -0.3 -0.6 -0.2 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.1 -0.2 -0.6 -0.2 N.D.
rhizosphere rhizosphere sample 3; outgrowth in LB -0.8 -0.2 +0.5 -0.3 N.D.
rhizosphere rhizosphere sample 2; outgrowth in LB +0.2 +0.0 -0.7 -0.1 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.0 -0.2 -0.2 -0.1 N.D.
carbon source Octanoic (C) -0.4 +0.0 -0.2 +0.0 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.6 -0.1 +0.1 +0.2 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 +0.1 -0.4 -0.3 N.D.
carbon source Azelaic (C) +0.1 -0.0 -0.5 -0.0 N.D.
phage Ra1_0.01 +0.1 -0.2 -0.2 -0.1 N.D.
phage Ra3_0.1 +0.2 -0.0 -0.3 -0.2 N.D.
carbon source Sebacic (C) +0.3 -0.2 -0.2 -0.2 N.D.
carbon source L-Glutamic (C) -0.3 -0.1 +0.4 -0.0 N.D.
carbon source adipate (C) -0.1 -0.1 +0.2 -0.1 N.D.
soil soil sample 4; outgrowth in LB -0.2 +0.0 +0.2 -0.1 N.D.
soil soil EcoFAB sample 1; outgrowth in LB -0.1 -0.2 +0.6 -0.4 N.D.
nitrogen source nitrogen source nitrite 0.5mM -0.0 -0.0 +0.3 -0.3 N.D.
nitrogen source nitrogen source nitrate 20mM -0.2 +0.1 +0.1 +0.1 N.D.
micoeukaryotes Dictyostellum sp.mixed culture-2 +0.4 -0.0 -0.3 +0.1 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -0.1 -0.0 +0.4 -0.1 N.D.
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.1 -0.1 +0.5 -0.1 N.D.
nitrogen source nitrogen source nitrate 20mM -0.1 +0.1 +0.3 -0.1 N.D.
root root sample 6; outgrowth in LB -0.1 +0.4 -0.3 +0.3 N.D.
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 -0.2 +0.0 +0.2 N.D.
carbon source Octanoic (C) -0.1 +0.0 +0.3 +0.2 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 -0.1 +0.1 +0.1 N.D.
rhizosphere rhizosphere sample 7; outgrowth in LB +0.2 +0.0 +0.4 -0.1 N.D.
rhizosphere rhizosphere sample 9; outgrowth in LB +0.0 -0.1 +0.4 +0.2 N.D.
root root EcoFAB sample 1; outgrowth in LB +0.3 +0.2 +0.2 -0.0 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 +0.2 +0.5 +0.4 N.D.
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