Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS20580 and ABZR87_RS20585 are separated by 265 nucleotidesABZR87_RS20585 and ABZR87_RS20590 are separated by 36 nucleotidesABZR87_RS20590 and ABZR87_RS20595 are separated by 60 nucleotidesABZR87_RS20595 and ABZR87_RS20600 are separated by 631 nucleotides ABZR87_RS20580: ABZR87_RS20580 - 23S ribosomal RNA, at 1,005,515 to 1,008,393 _RS20580 ABZR87_RS20585: ABZR87_RS20585 - tRNA-Ala, at 1,008,659 to 1,008,734 _RS20585 ABZR87_RS20590: ABZR87_RS20590 - tRNA-Ile, at 1,008,771 to 1,008,847 _RS20590 ABZR87_RS20595: ABZR87_RS20595 - 16S ribosomal RNA, at 1,008,908 to 1,010,447 _RS20595 ABZR87_RS20600: ABZR87_RS20600 - hypothetical protein, at 1,011,079 to 1,011,780 _RS20600
Group Condition ABZR87_RS20580 ABZR87_RS20585 ABZR87_RS20590 ABZR87_RS20595 ABZR87_RS20600
soil soil EcoFAB sample 1; outgrowth in LB N.D. N.D. N.D. N.D. -0.7
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. N.D. N.D. -0.4
micoeukaryotes C.elegans, mixed culture-1 N.D. N.D. N.D. N.D. -0.3
rhizosphere rhizosphere sample 3; outgrowth in LB N.D. N.D. N.D. N.D. -0.2
carbon source Azelaic (C) N.D. N.D. N.D. N.D. -0.2
nitrogen source nitrogen source nitrite 0.5mM N.D. N.D. N.D. N.D. -0.2
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB N.D. N.D. N.D. N.D. -0.1
carbon source Beta-alanine (C) N.D. N.D. N.D. N.D. +0.2
carbon source succinate (C) N.D. N.D. N.D. N.D. +0.2
rhizosphere rhizosphere sample 9; outgrowth in LB N.D. N.D. N.D. N.D. +0.2
carbon source Hexanoic (C) N.D. N.D. N.D. N.D. +0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. N.D. N.D. +0.2
carbon source D-Glucose (C) N.D. N.D. N.D. N.D. +0.2
root root sample 6; outgrowth in LB N.D. N.D. N.D. N.D. +0.2
soil soil sample 7; outgrowth in LB N.D. N.D. N.D. N.D. +0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. N.D. N.D. +0.2
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB N.D. N.D. N.D. N.D. +0.2
rhizosphere rhizosphere sample 6; outgrowth in LB N.D. N.D. N.D. N.D. +0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. N.D. N.D. +0.2
nitrogen source nitrogen source nitrate 20mM N.D. N.D. N.D. N.D. +0.2
carbon source D-Glucose (C) N.D. N.D. N.D. N.D. +0.2
root root EcoFAB sample 1; outgrowth in LB N.D. N.D. N.D. N.D. +0.3
root root sample 5; outgrowth in LB N.D. N.D. N.D. N.D. +0.3
phage Ra3_0.01 N.D. N.D. N.D. N.D. +0.3
root root EcoFAB sample 2; outgrowth in LB N.D. N.D. N.D. N.D. +0.3
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB N.D. N.D. N.D. N.D. +0.3
phage Ra3_1 N.D. N.D. N.D. N.D. +0.3
phage Ra1_0.1 N.D. N.D. N.D. N.D. +0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. N.D. N.D. +0.4
carbon source L-Glutamic (C) N.D. N.D. N.D. N.D. +0.5
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ABZR87_RS20585
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