Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS20565 and ABZR87_RS20570 overlap by 68 nucleotidesABZR87_RS20570 and ABZR87_RS20575 are separated by 332 nucleotidesABZR87_RS20575 and ABZR87_RS20580 are separated by 114 nucleotidesABZR87_RS20580 and ABZR87_RS20585 are separated by 265 nucleotides ABZR87_RS20565: ABZR87_RS20565 - DNA polymerase Y family protein, at 1,002,483 to 1,004,066 _RS20565 ABZR87_RS20570: ABZR87_RS20570 - translesion DNA synthesis-associated protein ImuA, at 1,003,999 to 1,004,955 _RS20570 ABZR87_RS20575: ABZR87_RS20575 - 5S ribosomal RNA, at 1,005,288 to 1,005,400 _RS20575 ABZR87_RS20580: ABZR87_RS20580 - 23S ribosomal RNA, at 1,005,515 to 1,008,393 _RS20580 ABZR87_RS20585: ABZR87_RS20585 - tRNA-Ala, at 1,008,659 to 1,008,734 _RS20585
Group Condition ABZR87_RS20565 ABZR87_RS20570 ABZR87_RS20575 ABZR87_RS20580 ABZR87_RS20585
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -0.0 -0.9 N.D. N.D. N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 -0.5 N.D. N.D. N.D.
soil soil sample 2; outgrowth in LB -0.2 -0.3 N.D. N.D. N.D.
no_plant_soil no_plant_soil sample 1; outgrowth in LB -0.2 -0.2 N.D. N.D. N.D.
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB +0.0 -0.5 N.D. N.D. N.D.
soil soil sample 9; outgrowth in LB -0.2 -0.2 N.D. N.D. N.D.
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.2 -0.2 N.D. N.D. N.D.
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.1 -0.3 N.D. N.D. N.D.
carbon source Lauric (C) -0.2 -0.2 N.D. N.D. N.D.
root root sample 4; outgrowth in LB -0.3 -0.1 N.D. N.D. N.D.
carbon source Glycerol (C) -0.2 -0.2 N.D. N.D. N.D.
micoeukaryotes C.elegans, mixed culture-2 +0.0 -0.3 N.D. N.D. N.D.
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.3 +0.0 N.D. N.D. N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 +0.2 N.D. N.D. N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB +0.1 -0.3 N.D. N.D. N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 +0.1 N.D. N.D. N.D.
soil soil EcoFAB sample 1; outgrowth in LB -0.4 +0.2 N.D. N.D. N.D.
rhizosphere rhizosphere sample 2; outgrowth in LB -0.3 +0.1 N.D. N.D. N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB +0.2 -0.3 N.D. N.D. N.D.
root root sample 5; outgrowth in LB +0.3 -0.3 N.D. N.D. N.D.
carbon source Sebacic (C) -0.3 +0.3 N.D. N.D. N.D.
rhizosphere rhizosphere sample 9; outgrowth in LB +0.2 -0.2 N.D. N.D. N.D.
carbon source Octanoic (C) -0.1 +0.2 N.D. N.D. N.D.
soil soil sample 6; outgrowth in LB -0.1 +0.2 N.D. N.D. N.D.
nitrogen source nitrogen source nitrate 5mM -0.2 +0.3 N.D. N.D. N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 +0.5 N.D. N.D. N.D.
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 +0.2 N.D. N.D. N.D.
root root EcoFAB sample 2; outgrowth in LB +0.0 +0.3 N.D. N.D. N.D.
root root sample 6; outgrowth in LB +0.2 +0.4 N.D. N.D. N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +0.3 N.D. N.D. N.D.
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