Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS20315 and ABZR87_RS20320 are separated by 1 nucleotidesABZR87_RS20320 and ABZR87_RS20325 are separated by 41 nucleotidesABZR87_RS20325 and ABZR87_RS20330 are separated by 18 nucleotidesABZR87_RS20330 and ABZR87_RS20335 are separated by 100 nucleotides ABZR87_RS20315: ABZR87_RS20315 - NAD(P)-dependent oxidoreductase, at 945,743 to 946,588 _RS20315 ABZR87_RS20320: ABZR87_RS20320 - galactarate dehydratase, at 946,590 to 948,191 _RS20320 ABZR87_RS20325: ABZR87_RS20325 - enolase C-terminal domain-like protein, at 948,233 to 949,642 _RS20325 ABZR87_RS20330: ABZR87_RS20330 - MFS transporter, at 949,661 to 951,013 _RS20330 ABZR87_RS20335: ABZR87_RS20335 - aldehyde dehydrogenase (NADP(+)), at 951,114 to 952,685 _RS20335
Group Condition ABZR87_RS20315 ABZR87_RS20320 ABZR87_RS20325 ABZR87_RS20330 ABZR87_RS20335
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.3 +0.3 -0.6 +0.2 -0.6
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -1.1 +0.1 +0.3 -0.1 -0.1
carbon source 4-Hydroxybenzoic Acid (C) +0.0 -0.3 -0.4 -0.2 +0.1
root root sample 6; outgrowth in LB -0.8 -0.1 -0.2 +0.2 +0.2
carbon source Octanoic (C) +0.2 -0.3 +0.0 -0.3 -0.4
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 -0.1 -0.4 -0.2 +0.2
carbon source Octanoic (C) -0.4 -0.1 +0.2 -0.0 -0.3
micoeukaryotes C.elegans, mixed culture-1 +0.2 +0.0 -0.6 -0.2 +0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 +0.3 +0.0 +0.1 -0.8
rhizosphere rhizosphere sample 6; outgrowth in LB -0.5 +0.2 +0.0 -0.1 +0.1
carbon source L-Glutamic (C) -0.2 +0.2 -0.1 -0.2 +0.2
root root EcoFAB sample 1; outgrowth in LB -0.4 +0.4 -0.0 -0.1 -0.2
carbon source Sebacic (C) +0.2 -0.1 -0.1 -0.5 +0.3
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.1 -0.3 -0.2 -0.1 +0.3
rhizosphere rhizosphere sample 1; outgrowth in LB +0.1 +0.2 +0.1 -0.3 -0.4
nitrogen source nitrogen source nitrite 5mM +0.2 +0.2 -0.3 -0.3 +0.1
nitrogen source nitrogen source nitrite 0.5mM -0.2 -0.2 +0.0 -0.2 +0.4
no_plant_soil no_plant_soil sample 3; outgrowth in LB -0.1 +0.1 +0.2 +0.1 -0.3
soil soil sample 4; outgrowth in LB -0.5 +0.2 -0.1 +0.0 +0.3
carbon source Dodecandioic (C) -0.1 +0.2 +0.2 +0.1 -0.2
rhizosphere rhizosphere sample 7; outgrowth in LB -0.3 +0.0 +0.5 -0.1 -0.0
rhizosphere rhizosphere sample 9; outgrowth in LB +0.0 -0.1 +0.5 -0.1 -0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.0 +0.2 +0.4 -0.1 -0.2
soil soil EcoFAB sample 1; outgrowth in LB -0.3 +0.1 +0.5 +0.3 -0.2
root root sample 4; outgrowth in LB -0.3 +0.6 +0.3 +0.1 -0.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 +0.6 -0.1 +0.4 +0.1
nitrogen source nitrogen source Ammonium chloride 20mM +0.1 +0.1 +0.2 +0.2 +0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 +1.0 +0.4 -0.1 -0.2
nitrogen source nitrogen source nitrate 5mM +0.4 -0.0 +0.0 +0.2 +0.5
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 -0.0 +0.4 +0.5 -0.0
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