Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS19770 and ABZR87_RS19775 are separated by 156 nucleotidesABZR87_RS19775 and ABZR87_RS19780 are separated by 140 nucleotidesABZR87_RS19780 and ABZR87_RS19785 are separated by 11 nucleotidesABZR87_RS19785 and ABZR87_RS19790 are separated by 110 nucleotides ABZR87_RS19770: ABZR87_RS19770 - H-NS family nucleoid-associated regulatory protein, at 808,919 to 809,188 _RS19770 ABZR87_RS19775: ABZR87_RS19775 - DMT family transporter, at 809,345 to 810,247 _RS19775 ABZR87_RS19780: ABZR87_RS19780 - Lrp/AsnC family transcriptional regulator, at 810,388 to 810,834 _RS19780 ABZR87_RS19785: ABZR87_RS19785 - cystathionine beta-lyase, at 810,846 to 812,024 _RS19785 ABZR87_RS19790: ABZR87_RS19790 - Lrp/AsnC family transcriptional regulator, at 812,135 to 812,611 _RS19790
Group Condition ABZR87_RS19770 ABZR87_RS19775 ABZR87_RS19780 ABZR87_RS19785 ABZR87_RS19790
carbon source Octanoic (C) -3.6 -0.1 -0.7 -0.1 -0.1
carbon source Octanoic (C) -3.1 -0.2 -0.2 +0.1 -0.4
carbon source Heptanoic (C) -1.9 -0.1 -0.4 -0.2 -0.2
carbon source Heptanoic (C) -1.7 -0.3 -0.3 -0.2 -0.1
carbon source Lauric (C) -0.9 -0.1 -0.3 -0.1 -0.2
rhizosphere rhizosphere sample 3; outgrowth in LB -0.6 -0.1 -0.3 -0.2 -0.3
root root sample 4; outgrowth in LB -0.4 -0.5 +0.0 -0.1 -0.3
root root EcoFAB sample 2; outgrowth in LB -0.3 -0.5 -0.2 -0.2 -0.1
soil soil EcoFAB sample 1; outgrowth in LB -0.4 -0.9 -0.2 +0.0 +0.3
carbon source Dodecandioic (C) -0.7 -0.1 -0.1 -0.0 -0.0
carbon source Azelaic (C) -0.6 +0.1 -0.3 +0.1 -0.3
rhizosphere rhizosphere sample 2; outgrowth in LB -0.4 +0.1 -0.2 +0.1 -0.6
carbon source Sebacic (C) -0.2 -0.1 -0.3 -0.0 -0.3
carbon source butyrate (C) -0.7 -0.0 -0.1 -0.1 +0.1
soil soil sample 3; outgrowth in LB -0.3 +0.1 -0.3 -0.1 -0.2
no_plant_soil no_plant_soil sample 3; outgrowth in LB -0.3 -0.1 -0.3 -0.2 +0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.6 +0.1 +0.0 +0.2 -0.4
carbon source succinate (C) -0.2 +0.2 -0.4 -0.1 -0.2
rhizosphere rhizosphere sample 8; outgrowth in LB -0.5 +0.1 -0.2 -0.1 +0.1
soil soil sample 1; outgrowth in LB -0.2 +0.2 -0.3 -0.1 -0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.0 +0.2 -0.4 +0.1 -0.3
carbon source Sebacic (C) -0.1 +0.2 -0.4 -0.0 -0.1
carbon source Protocatechuic Acid (C) -0.3 +0.2 -0.2 -0.1 +0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 -0.2 +0.2 -0.1 +0.3
root root sample 6; outgrowth in LB -0.1 -0.2 -0.1 -0.1 +0.6
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.6 +0.1 +0.2 +0.0 +0.3
carbon source 4-Hydroxybenzoic Acid (C) -0.0 +0.4 -0.5 +0.2 +0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 -0.0 +0.4 -0.0 -0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 +0.3 +0.7 +0.0 +0.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.8 -0.1 +0.1 +0.2 +0.1
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