Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS19740 and ABZR87_RS19745 are separated by 61 nucleotidesABZR87_RS19745 and ABZR87_RS19750 overlap by 4 nucleotidesABZR87_RS19750 and ABZR87_RS19755 overlap by 14 nucleotidesABZR87_RS19755 and ABZR87_RS19760 are separated by 22 nucleotides ABZR87_RS19740: ABZR87_RS19740 - BON domain-containing protein, at 805,175 to 805,591 _RS19740 ABZR87_RS19745: ABZR87_RS19745 - DoxX family protein, at 805,653 to 806,123 _RS19745 ABZR87_RS19750: ABZR87_RS19750 - DNA-binding domain-containing protein, at 806,120 to 806,878 _RS19750 ABZR87_RS19755: ABZR87_RS19755 - DUF692 domain-containing protein, at 806,865 to 807,734 _RS19755 ABZR87_RS19760: ABZR87_RS19760 - DUF2282 domain-containing protein, at 807,757 to 808,023 _RS19760
Group Condition ABZR87_RS19740 ABZR87_RS19745 ABZR87_RS19750 ABZR87_RS19755 ABZR87_RS19760
carbon source Sebacic (C) -0.3 -1.2 +0.4 -0.1 -1.0
rhizosphere rhizosphere sample 9; outgrowth in LB -0.3 -0.3 -1.1 +0.1 -0.4
rhizosphere rhizosphere sample 1; outgrowth in LB -0.3 -0.8 -0.6 +0.0 -0.1
micoeukaryotes C.elegans, mixed culture-1 -0.2 -0.4 -0.6 +0.2 -0.5
soil soil EcoFAB sample 1; outgrowth in LB -0.0 -0.9 +0.0 -0.0 -0.5
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.4 -0.7 -0.4 +0.2 +0.3
soil soil sample 2; outgrowth in LB +0.2 -0.4 -0.5 +0.1 -0.4
rhizosphere rhizosphere sample 2; outgrowth in LB +0.1 -0.1 -1.2 +0.0 +0.1
carbon source Azelaic (C) +0.2 +0.2 -1.4 +0.1 -0.1
root root EcoFAB sample 2; outgrowth in LB -0.2 -0.3 -0.6 +0.2 +0.0
soil soil sample 3; outgrowth in LB +0.1 -0.9 +0.1 +0.1 -0.3
phage Ra1_0.1 -0.2 +0.4 -0.2 +0.3 -0.9
soil soil sample 9; outgrowth in LB -0.7 -0.1 +0.6 -0.1 +0.1
nitrogen source nitrogen source nitrite 1mM +0.6 -0.1 -0.5 +0.0 -0.2
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 -0.5 -0.4 +0.2 +0.4
root root sample 6; outgrowth in LB +0.2 -0.0 -0.9 +0.4 +0.4
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 -0.4 +0.3 +0.2 +0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 -0.4 -0.2 +0.5 +0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 -0.7 +0.4 +0.3 +0.2
carbon source Heptanoic (C) +0.5 +0.3 +0.1 +0.0 -0.6
root root sample 5; outgrowth in LB +0.3 -0.9 +0.5 +0.3 +0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 -0.9 +0.2 +0.7 +0.5
carbon source Octanoic (C) +0.1 +0.6 +0.7 +0.3 -1.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 -0.9 +0.7 +0.3 +0.7
carbon source Octanoic (C) +0.5 -1.0 +1.0 +0.1 +0.3
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -0.0 +0.3 +0.5 +0.6 -0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.7 -0.4 +1.0 +0.2 +0.4
nitrogen source nitrogen source nitrite 0.5mM +0.7 +0.3 +0.3 -0.1 +0.6
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 +0.1 +1.2 +0.2 +0.6
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.0 +1.0 -0.5 +0.6 +2.0
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ABZR87_RS19740
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ABZR87_RS19745
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ABZR87_RS19755
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ABZR87_RS19760
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