Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 129 experiments or choose conditions or try the comparative fitness browser

500 ntABZR87_RS19140 and ABZR87_RS19145 are separated by 16 nucleotidesABZR87_RS19145 and ABZR87_RS19150 are separated by 353 nucleotidesABZR87_RS19150 and ABZR87_RS19155 are separated by 65 nucleotidesABZR87_RS19155 and ABZR87_RS19160 are separated by 274 nucleotides ABZR87_RS19140: ABZR87_RS19140 - DUF3175 domain-containing protein, at 658,181 to 658,537 _RS19140 ABZR87_RS19145: ABZR87_RS19145 - hypothetical protein, at 658,554 to 658,835 _RS19145 ABZR87_RS19150: ABZR87_RS19150 - dodecin, at 659,189 to 659,437 _RS19150 ABZR87_RS19155: ABZR87_RS19155 - acid phosphatase, at 659,503 to 661,665 _RS19155 ABZR87_RS19160: ABZR87_RS19160 - cytochrome-c peroxidase, at 661,940 to 663,346 _RS19160
Group Condition ABZR87_RS19140 ABZR87_RS19145 ABZR87_RS19150 ABZR87_RS19155 ABZR87_RS19160
carbon source Octanoic (C) -0.8 -0.6 N.D. +0.3 +0.1
carbon source Dodecandioic (C) -0.7 -0.2 N.D. -0.1 -0.1
carbon source Protocatechuic Acid (C) -0.3 -0.1 N.D. -0.1 -0.5
carbon source Sebacic (C) -0.3 -0.3 N.D. -0.1 -0.2
carbon source Heptanoic (C) -0.3 -0.4 N.D. +0.0 -0.2
carbon source butyrate (C) -0.3 -0.0 N.D. -0.1 -0.4
carbon source Dodecandioic (C) -0.4 -0.3 N.D. -0.0 -0.1
carbon source D-Glucose (C) -0.3 -0.3 N.D. -0.1 +0.0
carbon source Heptanoic (C) -0.4 -0.2 N.D. -0.1 +0.1
nitrogen source nitrogen source nitrite 0.5mM -0.3 -0.4 N.D. +0.1 +0.0
carbon source Octanoic (C) -0.2 -0.5 N.D. +0.1 +0.0
carbon source Protocatechuic Acid (C) -0.2 +0.1 N.D. +0.2 -0.6
root root sample 6; outgrowth in LB -0.2 +0.4 N.D. -0.3 -0.4
rhizosphere rhizosphere sample 8; outgrowth in LB -0.4 +0.1 N.D. -0.1 -0.1
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.0 -0.3 N.D. -0.4 +0.3
carbon source Sebacic (C) -0.3 -0.2 N.D. +0.2 -0.0
no_plant_soil no_plant_soil sample 3; outgrowth in LB -0.2 +0.1 N.D. +0.2 -0.3
soil soil sample 8; outgrowth in LB -0.0 +0.3 N.D. -0.1 -0.3
control NoPredeControl +0.2 +0.2 N.D. -0.1 -0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +0.1 N.D. -0.1 -0.3
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.3 +0.2 N.D. -0.0 -0.4
phage Ra3_1 -0.4 +0.2 N.D. -0.0 +0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 -0.1 N.D. +0.2 -0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +0.1 N.D. +0.3 -0.4
rhizosphere rhizosphere sample 9; outgrowth in LB +0.3 +0.5 N.D. -0.0 -0.1
rhizosphere rhizosphere sample 2; outgrowth in LB +0.6 +0.2 N.D. +0.3 -0.2
root root sample 4; outgrowth in LB +0.5 +0.3 N.D. +0.0 +0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 +0.5 N.D. +0.3 +0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +0.2 N.D. +0.6 -0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.0 +0.3 N.D. +0.3 +0.8
remove
ABZR87_RS19140
plot		 remove
ABZR87_RS19145
plot		 remove
ABZR87_RS19150		 remove
ABZR87_RS19155
plot		 remove
ABZR87_RS19160
plot