Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS18850 and ABZR87_RS18855 are separated by 112 nucleotidesABZR87_RS18855 and ABZR87_RS18860 are separated by 162 nucleotidesABZR87_RS18860 and ABZR87_RS18865 are separated by 387 nucleotidesABZR87_RS18865 and ABZR87_RS18870 are separated by 14 nucleotides ABZR87_RS18850: ABZR87_RS18850 - PAS domain-containing methyl-accepting chemotaxis protein, at 581,848 to 583,392 _RS18850 ABZR87_RS18855: ABZR87_RS18855 - GlsB/YeaQ/YmgE family stress response membrane protein, at 583,505 to 583,759 _RS18855 ABZR87_RS18860: ABZR87_RS18860 - hypothetical protein, at 583,922 to 584,215 _RS18860 ABZR87_RS18865: ABZR87_RS18865 - MFS transporter, at 584,603 to 585,925 _RS18865 ABZR87_RS18870: ABZR87_RS18870 - nitrite reductase large subunit NirB, at 585,940 to 588,495 _RS18870
Group Condition ABZR87_RS18850 ABZR87_RS18855 ABZR87_RS18860 ABZR87_RS18865 ABZR87_RS18870
nitrogen source nitrogen source nitrate 20mM -0.0 N.D. +0.5 -1.9 -4.3
nitrogen source nitrogen source nitrate 20mM +0.0 N.D. +0.4 -2.7 -3.2
nitrogen source nitrogen source nitrate 5mM -0.0 N.D. +0.3 -1.9 -2.8
nitrogen source nitrogen source nitrate 5mM -0.0 N.D. +0.4 -2.2 -2.6
nitrogen source nitrogen source nitrite 5mM -0.1 N.D. +0.1 -2.0 -2.0
nitrogen source nitrogen source nitrite 5mM +0.1 N.D. +0.3 -1.9 -2.4
nitrogen source nitrogen source nitrite 1mM -0.1 N.D. +0.4 -1.4 -1.5
nitrogen source nitrogen source nitrite 0.5mM +0.0 N.D. +0.2 -1.2 -1.5
root root EcoFAB sample 2; outgrowth in LB +1.7 N.D. +0.6 -0.1 -0.2
soil soil sample 7; outgrowth in LB +2.2 N.D. +0.0 -0.2 -0.0
soil soil sample 5; outgrowth in LB +2.1 N.D. +0.2 -0.0 -0.0
soil soil sample 3; outgrowth in LB +2.6 N.D. -0.1 -0.1 -0.1
soil soil sample 6; outgrowth in LB +2.8 N.D. +0.0 -0.0 -0.0
soil soil sample 9; outgrowth in LB +2.9 N.D. -0.0 -0.2 +0.1
soil soil sample 2; outgrowth in LB +3.0 N.D. +0.1 -0.3 +0.1
soil soil sample 8; outgrowth in LB +3.0 N.D. +0.4 -0.3 +0.0
rhizosphere rhizosphere sample 3; outgrowth in LB +4.0 N.D. +0.0 -0.1 -0.0
soil soil sample 1; outgrowth in LB +4.0 N.D. +0.0 -0.1 +0.0
rhizosphere rhizosphere sample 2; outgrowth in LB +4.0 N.D. +0.3 -0.1 -0.1
soil soil sample 4; outgrowth in LB +3.6 N.D. +0.7 +0.0 -0.1
rhizosphere rhizosphere sample 9; outgrowth in LB +4.5 N.D. +0.1 -0.2 +0.1
rhizosphere rhizosphere sample 7; outgrowth in LB +3.9 N.D. +0.5 -0.1 +0.4
rhizosphere rhizosphere sample 4; outgrowth in LB +4.4 N.D. +0.4 -0.2 +0.0
rhizosphere rhizosphere sample 5; outgrowth in LB +4.3 N.D. +0.5 -0.0 +0.1
rhizosphere rhizosphere sample 8; outgrowth in LB +4.7 N.D. +0.4 -0.1 -0.2
rhizosphere rhizosphere sample 6; outgrowth in LB +4.7 N.D. +0.1 +0.2 +0.1
root root sample 4; outgrowth in LB +5.5 N.D. +0.2 -0.2 -0.3
rhizosphere rhizosphere sample 1; outgrowth in LB +5.8 N.D. -0.5 -0.1 +0.0
root root sample 6; outgrowth in LB +6.3 N.D. -0.0 +0.0 -0.2
root root sample 5; outgrowth in LB +5.5 N.D. +1.0 +0.0 -0.1
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