Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Ralstonia sp. UNC404CL21Col
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 129 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
ABZR87_RS18825 and ABZR87_RS18830 are separated by 7 nucleotides
ABZR87_RS18830 and ABZR87_RS18835 are separated by 86 nucleotides
ABZR87_RS18835 and ABZR87_RS18840 overlap by 4 nucleotides
ABZR87_RS18840 and ABZR87_RS18845 are separated by 15 nucleotides
ABZR87_RS18825: ABZR87_RS18825 - LuxR family transcriptional regulator, at 576,904 to 578,022
_RS18825
ABZR87_RS18830: ABZR87_RS18830 - NIPSNAP family protein, at 578,030 to 578,335
_RS18830
ABZR87_RS18835: ABZR87_RS18835 - cytochrome d ubiquinol oxidase subunit II, at 578,422 to 579,453
_RS18835
ABZR87_RS18840: ABZR87_RS18840 - cytochrome ubiquinol oxidase subunit I, at 579,450 to 580,838
_RS18840
ABZR87_RS18845: ABZR87_RS18845 - GbsR/MarR family transcriptional regulator, at 580,854 to 581,414
_RS18845
Group
Condition
ABZR87
_RS18825
ABZR87
_RS18830
ABZR87
_RS18835
ABZR87
_RS18840
ABZR87
_RS18845
carbon source
Octanoic (C)
+0.3
-0.0
-1.9
-1.7
-0.7
carbon source
Octanoic (C)
+0.1
+0.1
-1.8
-1.1
-0.2
soil
soil EcoFAB sample 1; outgrowth in LB
-0.3
+0.4
-1.0
-0.6
-0.2
micoeukaryotes
C.elegans, mixed culture-2
-0.3
+0.4
-0.7
-1.0
+0.2
micoeukaryotes
C.elegans, mixed culture-1
+0.2
+0.4
-0.9
-0.9
-0.1
carbon source
Heptanoic (C)
-0.1
+0.2
-0.5
-0.4
-0.4
rhizosphere
rhizosphere EcoFAB sample 2; outgrowth in LB
+0.0
-0.2
-0.4
-0.4
-0.2
carbon source
L-Glutamic (C)
+0.2
-1.4
-0.1
-0.0
+0.1
rhizosphere
rhizosphere EcoFAB sample 1; outgrowth in LB
-0.2
-0.5
+0.1
+0.1
-0.5
no_plant_soil
no_plant_soil sample 1; outgrowth in LB
+0.2
-0.4
-0.0
-0.3
-0.5
nitrogen source
nitrogen source nitrate 20mM
-0.1
-0.8
-0.0
+0.2
-0.1
carbon source
Heptanoic (C)
+0.0
+0.3
-0.4
-0.5
-0.2
micoeukaryotes
Acanthamoeba sp., muxed culture-1
-0.1
+0.5
-0.8
-0.6
+0.2
soil
soil sample 3; outgrowth in LB
+0.1
-0.9
+0.1
-0.1
+0.0
soil
soil EcoFAB sample 2; outgrowth in LB
+0.1
+0.4
-0.1
-0.8
-0.3
root
root EcoFAB sample 1; outgrowth in LB
+0.2
-0.9
+0.1
-0.1
+0.1
carbon source
Sebacic (C)
-0.2
+0.5
-0.4
-0.2
-0.3
micoeukaryotes
Dictyostellum sp.mixed culture-1
-0.0
+0.5
-0.5
-0.4
+0.0
no_plant_rhizosphere
no_plant_rhizosphere sample 1; outgrowth in LB
-0.0
-0.7
-0.0
+0.2
+0.3
no_plant_rhizosphere
no_plant_rhizosphere sample 2; outgrowth in LB
+0.0
-0.5
-0.3
-0.1
+0.6
no plant control
Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
-0.0
-0.2
-0.4
+0.2
+0.3
carbon source
Disodium Glutarate (C)
-0.0
+0.7
+0.1
-0.1
-0.5
in planta
Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
+0.4
-0.2
-0.1
+0.4
-0.2
root
root EcoFAB sample 2; outgrowth in LB
-0.2
+1.0
-0.3
+0.0
+0.0
root
root sample 6; outgrowth in LB
+0.2
+0.6
-0.1
-0.4
+0.5
in planta
Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
+0.2
+0.8
+0.3
-0.1
-0.4
no_plant_rhizosphere
no_plant_rhizosphere sample 3; outgrowth in LB
+0.2
+0.2
-0.1
+0.2
+0.5
control
NoPredeControl
-0.1
+0.3
-0.0
+0.3
+0.7
in planta
Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
+0.4
+0.5
+0.1
+0.3
+0.1
micoeukaryotes
Dictyostellum sp.mixed culture-2
+0.1
-0.1
+0.4
+1.0
+0.4
remove
ABZR87_RS18825
plot
remove
ABZR87_RS18830
plot
remove
ABZR87_RS18835
remove
ABZR87_RS18840
plot
remove
ABZR87_RS18845
plot