Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS18820 and ABZR87_RS18825 are separated by 252 nucleotidesABZR87_RS18825 and ABZR87_RS18830 are separated by 7 nucleotidesABZR87_RS18830 and ABZR87_RS18835 are separated by 86 nucleotidesABZR87_RS18835 and ABZR87_RS18840 overlap by 4 nucleotides ABZR87_RS18820: ABZR87_RS18820 - hypothetical protein, at 574,549 to 576,651 _RS18820 ABZR87_RS18825: ABZR87_RS18825 - LuxR family transcriptional regulator, at 576,904 to 578,022 _RS18825 ABZR87_RS18830: ABZR87_RS18830 - NIPSNAP family protein, at 578,030 to 578,335 _RS18830 ABZR87_RS18835: ABZR87_RS18835 - cytochrome d ubiquinol oxidase subunit II, at 578,422 to 579,453 _RS18835 ABZR87_RS18840: ABZR87_RS18840 - cytochrome ubiquinol oxidase subunit I, at 579,450 to 580,838 _RS18840
Group Condition ABZR87_RS18820 ABZR87_RS18825 ABZR87_RS18830 ABZR87_RS18835 ABZR87_RS18840
carbon source Octanoic (C) -0.1 +0.3 -0.0 -1.9 -1.7
carbon source Octanoic (C) -0.2 +0.1 +0.1 -1.8 -1.1
micoeukaryotes C.elegans, mixed culture-2 -0.2 -0.3 +0.4 -0.7 -1.0
micoeukaryotes Acanthamoeba sp., muxed culture-1 -0.3 -0.1 +0.5 -0.8 -0.6
soil soil EcoFAB sample 1; outgrowth in LB +0.1 -0.3 +0.4 -1.0 -0.6
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB -0.3 +0.0 -0.2 -0.4 -0.4
rhizosphere rhizosphere sample 3; outgrowth in LB -0.9 +0.0 -0.1 -0.1 -0.1
soil soil sample 3; outgrowth in LB -0.3 +0.1 -0.9 +0.1 -0.1
carbon source L-Glutamic (C) +0.2 +0.2 -1.4 -0.1 -0.0
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.4 -0.1 -0.0 -0.4 -0.3
micoeukaryotes C.elegans, mixed culture-1 +0.2 +0.2 +0.4 -0.9 -0.9
carbon source Heptanoic (C) -0.1 -0.1 +0.2 -0.5 -0.4
carbon source Heptanoic (C) -0.1 +0.0 +0.3 -0.4 -0.5
carbon source Sebacic (C) -0.6 -0.2 +0.5 -0.4 -0.2
root root EcoFAB sample 1; outgrowth in LB +0.0 +0.2 -0.9 +0.1 -0.1
nitrogen source nitrogen source nitrate 20mM +0.2 -0.1 -0.8 -0.0 +0.2
phage Ra1_0.01 -0.5 +0.0 -0.3 +0.2 -0.0
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.0 -0.0 +0.5 -0.5 -0.4
soil soil EcoFAB sample 2; outgrowth in LB +0.1 +0.1 +0.4 -0.1 -0.8
root root sample 4; outgrowth in LB +0.2 +0.2 -0.6 +0.1 -0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 +0.0 -0.6 -0.1 +0.4
root root sample 6; outgrowth in LB -0.0 +0.2 +0.6 -0.1 -0.4
soil soil sample 9; outgrowth in LB -0.2 +0.1 +0.6 +0.0 -0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 +0.1 -0.1 +0.4 +0.4
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 +0.2 +0.5 -0.0 +0.2
root root EcoFAB sample 2; outgrowth in LB +0.2 -0.2 +1.0 -0.3 +0.0
carbon source Azelaic (C) +0.2 -0.1 +0.5 -0.0 +0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 +0.2 +0.8 +0.3 -0.1
micoeukaryotes Dictyostellum sp.mixed culture-2 -0.0 +0.1 -0.1 +0.4 +1.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 +0.4 +0.5 +0.1 +0.3
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