Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS18815 and ABZR87_RS18820 are separated by 78 nucleotidesABZR87_RS18820 and ABZR87_RS18825 are separated by 252 nucleotidesABZR87_RS18825 and ABZR87_RS18830 are separated by 7 nucleotidesABZR87_RS18830 and ABZR87_RS18835 are separated by 86 nucleotides ABZR87_RS18815: ABZR87_RS18815 - membrane dipeptidase, at 573,043 to 574,470 _RS18815 ABZR87_RS18820: ABZR87_RS18820 - hypothetical protein, at 574,549 to 576,651 _RS18820 ABZR87_RS18825: ABZR87_RS18825 - LuxR family transcriptional regulator, at 576,904 to 578,022 _RS18825 ABZR87_RS18830: ABZR87_RS18830 - NIPSNAP family protein, at 578,030 to 578,335 _RS18830 ABZR87_RS18835: ABZR87_RS18835 - cytochrome d ubiquinol oxidase subunit II, at 578,422 to 579,453 _RS18835
Group Condition ABZR87_RS18815 ABZR87_RS18820 ABZR87_RS18825 ABZR87_RS18830 ABZR87_RS18835
carbon source Octanoic (C) -0.3 -0.1 +0.3 -0.0 -1.9
carbon source Octanoic (C) +0.1 -0.2 +0.1 +0.1 -1.8
soil soil EcoFAB sample 1; outgrowth in LB -0.9 +0.1 -0.3 +0.4 -1.0
rhizosphere rhizosphere sample 3; outgrowth in LB -0.3 -0.9 +0.0 -0.1 -0.1
soil soil sample 3; outgrowth in LB -0.3 -0.3 +0.1 -0.9 +0.1
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.2 -0.2 -0.2 -0.5 +0.1
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -0.2 -0.2 +0.0 -0.5 -0.3
carbon source L-Glutamic (C) +0.3 +0.2 +0.2 -1.4 -0.1
micoeukaryotes C.elegans, mixed culture-2 -0.0 -0.2 -0.3 +0.4 -0.7
nitrogen source nitrogen source nitrate 20mM +0.0 +0.2 -0.1 -0.8 -0.0
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.1 -0.3 -0.1 +0.5 -0.8
root root EcoFAB sample 1; outgrowth in LB -0.1 +0.0 +0.2 -0.9 +0.1
phage Ra1_0.01 -0.1 -0.5 +0.0 -0.3 +0.2
carbon source Sebacic (C) +0.1 -0.6 -0.2 +0.5 -0.4
carbon source Heptanoic (C) +0.3 -0.1 -0.1 +0.2 -0.5
root root sample 4; outgrowth in LB -0.2 +0.2 +0.2 -0.6 +0.1
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.2 -0.0 -0.0 +0.5 -0.5
carbon source Heptanoic (C) +0.2 -0.1 +0.0 +0.3 -0.4
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 +0.4 +0.0 -0.6 -0.1
micoeukaryotes C.elegans, mixed culture-1 +0.2 +0.2 +0.2 +0.4 -0.9
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 -0.2 +0.2 +0.5 -0.0
soil soil sample 9; outgrowth in LB -0.1 -0.2 +0.1 +0.6 +0.0
carbon source Disodium Glutarate (C) +0.1 +0.2 -0.2 +0.5 +0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.5 -0.1 +0.3 -0.1 +0.1
root root EcoFAB sample 2; outgrowth in LB +0.1 +0.2 -0.2 +1.0 -0.3
rhizosphere rhizosphere sample 8; outgrowth in LB -0.1 +0.3 +0.1 -0.0 +0.5
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.7 -0.2 +0.1 -0.1 +0.4
carbon source Azelaic (C) +0.3 +0.2 -0.1 +0.5 -0.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.0 -0.1 +0.2 +0.8 +0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +0.4 +0.4 +0.5 +0.1
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