Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS18750 and ABZR87_RS18755 are separated by 101 nucleotidesABZR87_RS18755 and ABZR87_RS18760 are separated by 886 nucleotidesABZR87_RS18760 and ABZR87_RS18765 are separated by 134 nucleotidesABZR87_RS18765 and ABZR87_RS18770 are separated by 94 nucleotides ABZR87_RS18750: ABZR87_RS18750 - AMP-binding protein, at 558,697 to 560,394 _RS18750 ABZR87_RS18755: ABZR87_RS18755 - DUF1488 family protein, at 560,496 to 560,837 _RS18755 ABZR87_RS18760: ABZR87_RS18760 - hypothetical protein, at 561,724 to 562,782 _RS18760 ABZR87_RS18765: ABZR87_RS18765 - S53 family peptidase, at 562,917 to 564,281 _RS18765 ABZR87_RS18770: ABZR87_RS18770 - S10 family peptidase, at 564,376 to 566,109 _RS18770
Group Condition ABZR87_RS18750 ABZR87_RS18755 ABZR87_RS18760 ABZR87_RS18765 ABZR87_RS18770
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.0 -0.1 +0.2 -2.2 +0.0
carbon source Lauric (C) -0.3 -1.8 +0.9 +0.1 +0.1
rhizosphere rhizosphere sample 2; outgrowth in LB -0.1 -0.1 -0.1 -0.5 -0.0
soil soil EcoFAB sample 1; outgrowth in LB +0.4 -1.2 +0.3 -0.4 +0.1
carbon source Heptanoic (C) -0.1 -1.1 +0.5 -0.0 +0.0
carbon source Heptanoic (C) -0.1 -0.7 +0.5 -0.1 -0.1
rhizosphere rhizosphere sample 9; outgrowth in LB +0.1 -0.6 -0.2 +0.2 -0.0
carbon source Azelaic (C) +0.0 -0.6 -0.1 +0.2 -0.0
rhizosphere rhizosphere sample 3; outgrowth in LB -0.0 -0.4 -0.3 +0.0 +0.3
carbon source Octanoic (C) -0.0 -2.1 +2.1 -0.6 +0.3
soil soil sample 9; outgrowth in LB -0.1 +0.2 -0.3 -0.3 +0.1
no_plant_soil no_plant_soil sample 3; outgrowth in LB +0.2 -0.6 +0.0 -0.0 +0.1
carbon source Dodecandioic (C) +0.1 -0.6 +0.2 +0.0 +0.1
carbon source Dodecandioic (C) -0.1 -0.5 +0.1 +0.2 +0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 -0.4 -0.1 +0.2 -0.0
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +0.2 -0.8 +0.2 +0.1
no_plant_soil no_plant_soil sample 2; outgrowth in LB +0.2 -0.2 +0.1 -0.2 +0.2
soil soil sample 3; outgrowth in LB +0.2 -0.4 +0.1 +0.1 +0.1
carbon source 4-Hydroxybenzoic Acid (C) +0.1 +0.2 -0.3 +0.2 -0.1
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB +0.1 +0.2 +0.1 -0.4 +0.2
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB +0.2 -0.4 -0.1 +0.3 +0.3
carbon source Sebacic (C) +0.2 -0.2 +0.0 +0.3 +0.2
nitrogen source nitrogen source nitrite 0.5mM +0.0 +0.6 +0.1 -0.2 +0.1
carbon source Octanoic (C) -0.2 -1.5 +1.9 +0.3 +0.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 -0.1 +0.5 +0.1 +0.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.5 +0.1 +0.3 -0.4 +0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 -0.2 +0.3 +0.1 +0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 +0.5 -0.2 -0.1 +0.4
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 +0.2 +0.2 +0.5 +0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 -0.0 +0.0 +0.5 +0.2
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ABZR87_RS18750
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ABZR87_RS18755
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ABZR87_RS18765
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ABZR87_RS18770
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