Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 129 experiments or choose conditions or try the comparative fitness browser

500 ntABZR87_RS17680 and ABZR87_RS17685 are separated by 4 nucleotidesABZR87_RS17685 and ABZR87_RS17690 are separated by 115 nucleotidesABZR87_RS17690 and ABZR87_RS17695 are separated by 114 nucleotidesABZR87_RS17695 and ABZR87_RS17700 are separated by 17 nucleotides ABZR87_RS17680: ABZR87_RS17680 - flagellar brake protein, at 332,558 to 333,439 _RS17680 ABZR87_RS17685: ABZR87_RS17685 - LysR family transcriptional regulator, at 333,444 to 334,328 _RS17685 ABZR87_RS17690: ABZR87_RS17690 - multidrug/biocide efflux PACE transporter, at 334,444 to 334,881 _RS17690 ABZR87_RS17695: ABZR87_RS17695 - helix-turn-helix transcriptional regulator, at 334,996 to 335,634 _RS17695 ABZR87_RS17700: ABZR87_RS17700 - DUF1059 domain-containing protein, at 335,652 to 335,870 _RS17700
Group Condition ABZR87_RS17680 ABZR87_RS17685 ABZR87_RS17690 ABZR87_RS17695 ABZR87_RS17700
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.0 -0.6 -0.1 -1.9 N.D.
carbon source Sebacic (C) -0.2 -0.1 -0.4 -1.6 N.D.
rhizosphere rhizosphere sample 3; outgrowth in LB -0.4 -0.9 -0.6 -0.4 N.D.
root root EcoFAB sample 1; outgrowth in LB -0.0 -0.1 -0.5 -1.5 N.D.
root root EcoFAB sample 2; outgrowth in LB -0.1 -0.5 -0.1 -1.4 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB +0.0 -0.3 -0.0 -1.6 N.D.
rhizosphere rhizosphere sample 1; outgrowth in LB -0.2 -0.2 +0.0 -1.5 N.D.
rhizosphere rhizosphere sample 6; outgrowth in LB +0.0 +0.0 -0.0 -1.6 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 +0.0 -0.4 -1.0 N.D.
soil soil EcoFAB sample 2; outgrowth in LB -0.4 -0.3 +0.2 -0.9 N.D.
soil soil sample 5; outgrowth in LB -0.1 -0.2 +0.0 -1.1 N.D.
rhizosphere rhizosphere sample 2; outgrowth in LB -0.2 +0.3 -0.5 -0.8 N.D.
rhizosphere rhizosphere sample 4; outgrowth in LB +0.1 +0.1 -0.0 -1.2 N.D.
soil soil sample 8; outgrowth in LB -0.3 -0.1 +0.2 -0.9 N.D.
soil soil sample 1; outgrowth in LB +0.1 +0.1 -0.1 -1.1 N.D.
carbon source Pimelic (C) +0.0 -0.4 +0.2 -0.8 N.D.
root root sample 6; outgrowth in LB +0.1 -0.5 +0.5 -0.9 N.D.
carbon source 3-Hydroxypropionate (C) -0.2 +0.1 +0.2 -0.9 N.D.
carbon source L-Glutamic (C) -0.1 +0.1 +0.4 -1.2 N.D.
carbon source Hexanoic (C) -0.0 +0.2 +0.2 -1.1 N.D.
carbon source Azelaic (C) +0.0 -0.2 +0.3 -0.9 N.D.
carbon source Protocatechuic Acid (C) +0.4 +0.0 +0.3 -1.4 N.D.
carbon source Octanoic (C) -0.0 +0.3 +0.1 -1.0 N.D.
carbon source Octanoic (C) +0.2 -0.0 +0.3 -0.9 N.D.
root root sample 5; outgrowth in LB +0.5 +0.2 -0.1 -1.0 N.D.
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.2 -0.3 +0.2 +0.7 N.D.
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 +0.3 +0.6 +0.0 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 +0.3 -0.4 +0.7 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 -0.2 +0.4 +1.4 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 +0.7 +0.8 +0.5 N.D.
remove
ABZR87_RS17680
plot		 remove
ABZR87_RS17685
plot		 remove
ABZR87_RS17690		 remove
ABZR87_RS17695
plot		 remove
ABZR87_RS17700
plot