Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS17675	ABZR87_RS17680	ABZR87_RS17685	ABZR87_RS17690	ABZR87_RS17695
root	root EcoFAB sample 2; outgrowth in LB	-0.7	-0.1	-0.5	-0.1	-1.4
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.2	+0.0	-0.6	-0.1	-1.9
no_plant_rhizosphere	no_plant_rhizosphere sample 2; outgrowth in LB	-0.4	+0.0	-0.3	-0.0	-1.6
root	root EcoFAB sample 1; outgrowth in LB	+0.0	-0.0	-0.1	-0.5	-1.5
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.1	-0.2	-0.2	+0.0	-1.5
rhizosphere	rhizosphere sample 3; outgrowth in LB	+0.4	-0.4	-0.9	-0.6	-0.4
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.1	-0.1	+0.0	-0.4	-1.0
soil	soil sample 5; outgrowth in LB	-0.2	-0.1	-0.2	+0.0	-1.1
root	root sample 6; outgrowth in LB	-0.6	+0.1	-0.5	+0.5	-0.9
carbon source	L-Glutamic (C)	-0.6	-0.1	+0.1	+0.4	-1.2
carbon source	Sebacic (C)	+1.0	-0.2	-0.1	-0.4	-1.6
soil	soil EcoFAB sample 2; outgrowth in LB	-0.0	-0.4	-0.3	+0.2	-0.9
soil	soil sample 8; outgrowth in LB	-0.3	-0.3	-0.1	+0.2	-0.9
carbon source	Pimelic (C)	-0.3	+0.0	-0.4	+0.2	-0.8
rhizosphere	rhizosphere sample 2; outgrowth in LB	-0.0	-0.2	+0.3	-0.5	-0.8
soil	soil sample 4; outgrowth in LB	-0.6	+0.1	+0.1	+0.1	-1.0
rhizosphere	rhizosphere sample 6; outgrowth in LB	+0.4	+0.0	+0.0	-0.0	-1.6
root	root sample 5; outgrowth in LB	-0.6	+0.5	+0.2	-0.1	-1.0
carbon source	Azelaic (C)	-0.1	+0.0	-0.2	+0.3	-0.9
rhizosphere	rhizosphere sample 5; outgrowth in LB	-0.8	+0.3	+0.3	-0.0	-0.5
soil	soil sample 1; outgrowth in LB	+0.4	+0.1	+0.1	-0.1	-1.1
carbon source	Protocatechuic Acid (C)	+0.2	+0.4	+0.0	+0.3	-1.4
carbon source	Octanoic (C)	+0.2	-0.0	+0.3	+0.1	-1.0
carbon source	Octanoic (C)	+0.2	+0.2	-0.0	+0.3	-0.9
micoeukaryotes	Dictyostellum sp.mixed culture-1	+0.2	-0.2	-0.3	+0.2	+0.7
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.3	-0.1	+0.3	-0.4	+0.7
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.5	-0.5	+0.3	+0.6	+0.0
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.4	-0.3	+0.7	+0.8	+0.5
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.6	-0.1	+0.1	+0.3	+0.7
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.1	-0.1	-0.2	+0.4	+1.4