Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS17585	ABZR87_RS17590	ABZR87_RS17595	ABZR87_RS17600	ABZR87_RS17605
carbon source	Octanoic (C)	-0.3	+0.3	-3.0	-0.1	-0.3
rhizosphere	rhizosphere sample 9; outgrowth in LB	+0.1	+0.1	-2.1	-0.2	+0.1
phage	Ra1_0.1	+0.0	-0.0	-1.8	-0.1	+0.0
carbon source	Octanoic (C)	+0.1	+0.2	-2.2	+0.2	+0.0
rhizosphere	rhizosphere sample 3; outgrowth in LB	+0.1	-0.2	-0.9	-0.1	-0.5
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.2	-0.1	-1.0	+0.1	-0.6
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.0	-0.2	-0.6	+0.1	-0.7
root	root sample 6; outgrowth in LB	+0.3	+0.4	-2.9	-0.0	+1.0
nitrogen source	nitrogen source nitrite 5mM	-0.0	+0.1	-1.2	+0.1	-0.2
nitrogen source	nitrogen source nitrite 1mM	+0.1	+0.0	-1.0	-0.0	-0.3
carbon source	D-Xylose (C)	-0.0	-0.0	-1.3	+0.0	+0.3
nitrogen source	nitrogen source nitrate 20mM	-0.2	-0.0	-0.7	-0.2	+0.1
rhizosphere	rhizosphere EcoFAB sample 1; outgrowth in LB	+0.2	+0.0	-1.7	+0.1	+0.5
phage	Ra3_0.01	+0.1	+0.0	-1.0	-0.1	+0.3
carbon source	propionate (C)	+0.2	-0.1	-1.0	+0.1	+0.1
rhizosphere	rhizosphere sample 5; outgrowth in LB	+0.1	+0.1	-0.9	+0.0	+0.2
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.0	+0.4	-0.6	+0.2	-0.6
nitrogen source	nitrogen source nitrate 5mM	+0.0	+0.1	-0.9	-0.1	+0.4
carbon source	Sebacic (C)	+0.3	+0.2	+0.2	+0.1	-0.9
root	root EcoFAB sample 2; outgrowth in LB	+0.6	+0.1	-0.9	+0.1	+0.2
root	root sample 5; outgrowth in LB	+0.3	-0.0	-0.5	-0.3	+0.7
carbon source	4-Hydroxybenzoic Acid (C)	-0.3	+0.1	+0.6	+0.1	+0.3
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.0	+0.2	-0.2	+0.2	+0.7
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.1	+0.1	+0.6	+0.2	-0.2
carbon source	Trans-2-methyl-2-butenoic (C)	-0.1	-0.1	+0.7	-0.1	+0.4
no_plant_rhizosphere	no_plant_rhizosphere sample 1; outgrowth in LB	+0.1	+0.1	+0.9	+0.0	-0.0
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.1	+0.1	+1.2	-0.1	+0.0
soil	soil sample 4; outgrowth in LB	-0.0	+0.1	+0.9	+0.0	+0.4
root	root sample 4; outgrowth in LB	-0.0	+0.1	+1.2	-0.1	+1.0
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.3	+0.2	+2.6	+0.4	+0.0