Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS17540 and ABZR87_RS17545 are separated by 61 nucleotidesABZR87_RS17545 and ABZR87_RS17550 are separated by 77 nucleotidesABZR87_RS17550 and ABZR87_RS17555 are separated by 2 nucleotidesABZR87_RS17555 and ABZR87_RS17560 are separated by 150 nucleotides ABZR87_RS17540: ABZR87_RS17540 - SMP-30/gluconolactonase/LRE family protein, at 296,786 to 297,736 _RS17540 ABZR87_RS17545: ABZR87_RS17545 - MFS transporter, at 297,798 to 299,162 _RS17545 ABZR87_RS17550: ABZR87_RS17550 - MFS transporter, at 299,240 to 300,565 _RS17550 ABZR87_RS17555: ABZR87_RS17555 - amidohydrolase family protein, at 300,568 to 301,500 _RS17555 ABZR87_RS17560: ABZR87_RS17560 - ABC transporter substrate-binding protein, at 301,651 to 302,859 _RS17560
Group Condition ABZR87_RS17540 ABZR87_RS17545 ABZR87_RS17550 ABZR87_RS17555 ABZR87_RS17560
carbon source Pimelic (C) +0.2 +0.0 +0.0 -0.5 -3.9
carbon source Pimelic (C) +0.2 -0.1 -0.2 -0.3 -2.9
carbon source Pimelic (C) -0.0 +0.0 +0.0 -0.1 -0.9
carbon source Octanoic (C) +0.2 -0.3 -0.4 -0.4 -0.0
carbon source adipate (C) -0.0 -0.1 -0.0 +0.0 -0.6
carbon source adipate (C) -0.0 -0.0 +0.0 -0.1 -0.6
carbon source Suberic (C) -0.1 +0.0 -0.1 +0.0 -0.5
carbon source Pimelic (C) +0.0 +0.1 +0.1 -0.1 -0.7
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 +0.0 +0.0 -0.1 -0.2
root root sample 6; outgrowth in LB -0.7 +0.1 +0.4 -0.2 -0.2
soil soil sample 5; outgrowth in LB -0.1 -0.1 +0.2 -0.2 -0.2
soil soil EcoFAB sample 2; outgrowth in LB -0.3 +0.1 -0.3 +0.1 +0.1
soil soil EcoFAB sample 1; outgrowth in LB +0.1 -0.7 +0.3 +0.2 +0.1
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 +0.3 +0.3 -0.1 -0.1
nitrogen source nitrogen source nitrate 5mM -0.2 +0.2 -0.2 +0.1 +0.0
carbon source Azelaic (C) +0.5 -0.4 +0.1 -0.3 +0.1
rhizosphere rhizosphere sample 9; outgrowth in LB -0.3 +0.2 +0.3 -0.0 -0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +0.1 -0.0 +0.2 -0.3
nitrogen source nitrogen source nitrite 0.5mM +0.3 -0.0 +0.0 +0.3 -0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 -0.1 +0.2 -0.1 -0.0
nitrogen source nitrogen source nitrate 5mM -0.2 +0.2 -0.0 +0.3 +0.2
nitrogen source nitrogen source nitrate 20mM +0.1 +0.3 -0.0 +0.2 -0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 -0.0 -0.1 +0.4 +0.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 +0.4 +0.4 +0.2 +0.0
carbon source 4-Hydroxybenzoic Acid (C) +0.3 +0.2 +0.2 +0.0 -0.1
carbon source Dodecandioic (C) +0.1 +0.1 +0.3 -0.1 +0.2
carbon source Octanoic (C) +0.1 +0.0 -0.2 +0.2 +0.5
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 +0.3 -0.0 +0.4 +0.1
nitrogen source nitrogen source nitrite 1mM +0.0 +0.4 +0.1 +0.3 +0.2
carbon source Sebacic (C) +0.2 -0.1 +0.2 +0.4 +0.3
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ABZR87_RS17545
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