Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 129 experiments or choose conditions or try the comparative fitness browser

500 ntABZR87_RS17475 and ABZR87_RS17480 overlap by 1 nucleotidesABZR87_RS17480 and ABZR87_RS17485 overlap by 4 nucleotidesABZR87_RS17485 and ABZR87_RS17490 are separated by 361 nucleotidesABZR87_RS17490 and ABZR87_RS17495 are separated by 27 nucleotides ABZR87_RS17475: ABZR87_RS17475 - 3-hydroxyisobutyrate dehydrogenase, at 280,587 to 281,480 _RS17475 ABZR87_RS17480: ABZR87_RS17480 - enoyl-CoA hydratase, at 281,480 to 282,277 _RS17480 ABZR87_RS17485: ABZR87_RS17485 - enoyl-CoA hydratase/isomerase family protein, at 282,274 to 283,425 _RS17485 ABZR87_RS17490: ABZR87_RS17490 - phospholipase D-like domain-containing protein, at 283,787 to 285,556 _RS17490 ABZR87_RS17495: ABZR87_RS17495 - acyl-CoA synthetase, at 285,584 to 287,077 _RS17495
Group Condition ABZR87_RS17475 ABZR87_RS17480 ABZR87_RS17485 ABZR87_RS17490 ABZR87_RS17495
carbon source butyrate (C) -3.9 N.D. -4.9 +0.2 +0.1
carbon source butyrate (C) -2.9 N.D. -3.3 -0.0 -0.0
carbon source Pimelic (C) -0.1 N.D. -0.4 -0.0 -2.2
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -1.5 N.D. -1.1 -0.0 +0.1
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.0 N.D. -1.4 +0.1 -0.0
carbon source Sebacic (C) +0.1 N.D. -0.4 -0.0 -1.8
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -1.2 N.D. -1.0 +0.1 +0.1
soil soil EcoFAB sample 1; outgrowth in LB -0.9 N.D. -0.9 -0.0 -0.2
carbon source Trans-2-methyl-2-butenoic (C) -1.7 N.D. -0.4 +0.1 +0.0
carbon source Octanoic (C) +0.6 N.D. -2.1 -0.3 -0.0
carbon source Hexanoic (C) -0.8 N.D. -1.0 -0.0 -0.0
carbon source Pimelic (C) +0.1 N.D. -0.0 -0.0 -2.0
carbon source Hexanoic (C) -0.9 N.D. -1.0 -0.1 +0.1
carbon source Trans-2-methyl-2-butenoic (C) -1.7 N.D. -0.2 -0.1 +0.2
carbon source Pimelic (C) -0.1 N.D. +0.3 -0.0 -1.8
carbon source Pimelic (C) +0.0 N.D. +0.1 -0.0 -1.6
carbon source Suberic (C) +0.1 N.D. +0.1 -0.0 -1.5
carbon source Sebacic (C) -0.1 N.D. -0.1 +0.3 -1.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 N.D. -0.5 -0.3 +0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 N.D. -0.6 +0.1 +0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 N.D. -0.9 +0.4 -0.0
carbon source 4-Hydroxybenzoic Acid (C) +0.2 N.D. -1.0 -0.1 +0.1
rhizosphere rhizosphere sample 9; outgrowth in LB -0.7 N.D. +0.2 -0.2 +0.1
carbon source Azelaic (C) +0.3 N.D. -0.1 +0.1 -0.7
rhizosphere rhizosphere sample 3; outgrowth in LB -0.3 N.D. +0.5 -0.4 +0.1
carbon source Dodecandioic (C) +0.4 N.D. +0.3 +0.1 -0.6
carbon source Dodecandioic (C) +0.7 N.D. +0.6 +0.0 -0.6
carbon source D-Glucose (C) -0.2 N.D. +1.4 +0.0 -0.0
carbon source D-Glucose (C) -0.0 N.D. +1.9 +0.1 +0.0
carbon source L-Glutamic (C) -0.7 N.D. +12.1 +0.2 +0.0
remove
ABZR87_RS17475
plot		 remove
ABZR87_RS17480
plot		 remove
ABZR87_RS17485		 remove
ABZR87_RS17490
plot		 remove
ABZR87_RS17495
plot